Evidence map›Paper›PMID 28619968›Full record

ArticleCancer immunology research2017

Breast Cancer Neoantigens Can Induce CD8

Xiuli Zhang, Samuel Kim, Jasreet Hundal, John M Herndon, Shunqiang Li, Allegra A Petti, Savas D Soysal, Lijin Li, Mike D McLellan, Jeremy Hoog and 12 more

Abstract read
In one paragraph

Article in Cancer immunology research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 2 pooled it
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 2 syntheses or guidelines pooled it, 91 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Personalizing DNA Cancer Vaccines.Journal of personalized medicine · 2025
    Review
  6. Review
  7. New insights on anti-tumor immunity of CD8Journal of translational medicine · 2025
    Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Public neoantigens in breast cancer immunotherapy (Review).International journal of molecular medicine · 2024
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 1 institution in 1 country.

Xiuli ZhangDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Samuel KimDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Jasreet HundalMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
John M HerndonDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Shunqiang LiDepartment of Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, Missouri.
Allegra A PettiMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Savas D SoysalDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Lijin LiDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Mike D McLellanMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Jeremy HoogDepartment of Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, Missouri.
Tina PrimeauDepartment of Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, Missouri.
Nancy MyersDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Tammi L VickeryCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Mark SturmoskiDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
Ian S HagemannDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri.
Chris A MillerMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Matthew J EllisDepartment of Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, Missouri.
Elaine R MardisMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Ted HansenDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri.
Timothy P FlemingDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
S Peter GoedegebuureDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri.
William E GillandersDepartment of Surgery, Washington University School of Medicine, St. Louis, Missouri. gillandersw@wudosis.wustl.edu.
University Hospital of Basel · CH

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
SURGICAL ONCOLOGY TRAINING GRANTT32CA009621 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN, William E. Gillanders · 1988 to 2026
$12.9M
NCI NIH HHS P30 CA091842NCI NIH HHS T32 CA009621
6 · The paper itself

Abstract

Next-generation sequencing technologies have provided insights into the biology and mutational landscape of cancer. Here, we evaluate the relevance of cancer neoantigens in human breast cancers. Using patient-derived xenografts from three patients with advanced breast cancer (xenografts were designated as WHIM30, WHIM35, and WHIM37), we sequenced exomes of tumor and patient-matched normal cells. We identified 2,091 (WHIM30), 354 (WHIM35), and 235 (WHIM37) nonsynonymous somatic mutations. A computational analysis identified and prioritized HLA class I-restricted candidate neoantigens expressed in the dominant tumor clone. Each candidate neoantigen was evaluated using peptide-binding assays, T-cell cultures that measure the ability of CD8

Indexed as

AnimalsAntigens, NeoplasmBreast NeoplasmsCD8-Positive T-LymphocytesEpitope MappingEpitopesExomeFemaleHigh-Throughput Nucleotide SequencingHumansMiceMutationT-Lymphocytes, CytotoxicXenograft Model Antitumor AssaysAntigens, NeoplasmEpitopes

Identifiers

PMID28619968
PMCPMC5647648
OpenAlexW2625948243

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.