ArticleNature protocols2017
Biological and chemical strategies for exploring inter- and intra-kingdom communication mediated via bacterial volatile signals.
Article in Nature protocols, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed, 47 citations in OpenAlex.
- Light-Dependent Production of Volatile Organic Compounds in Magnaporthe oryzae Mediates Self-Inhibition and Interspecific Antagonism.The plant pathology journal · 2026Article
- Dual Roles of Bacillus velezensis ES-120 in Plant Disease Suppression and Growth Promotion.Plant, cell & environment · 2026Article
- Live-exudation assisted phytobiome culturomics system (LEAP-CS): a high-throughput culturomics system for studying plant-microbiome interactions through diffusible metabolites.Plant methods · 2026Article
- Plant-Associated Microbiomes: Crosstalk and Engineering to Improve Nutrient Use Efficiency (NUE) in Crops of Global Importance.Plants (Basel, Switzerland) · 2026Review
- An engineered culture vessel and flow system to improve the in vitro analysis of volatile organic compounds.Communications engineering · 2025Article
- Differences in the Microbial Composition and Function of theMicroorganisms · 2024Article
- How Bacteria Cope with Oxidative Stress Induced by Cadmium: Volatile Communication Is Differentially Perceived among Strains.Antioxidants (Basel, Switzerland) · 2024Article
- Role of Root Exudates on the Soil Microbial Diversity and Biogeochemistry of Heavy Metals.Applied biochemistry and biotechnology · 2024Review
- History of a model plant growth-promoting rhizobacterium,Frontiers in plant science · 2023Review
- How Do Herbal Cigarettes Compare To Tobacco? A Comprehensive Review of Their Sensory Characters, Phytochemicals, and Functional Properties.ACS omega · 2022Review
- The rhizosphere microbiome: Plant-microbial interactions for resource acquisition.Journal of applied microbiology · 2022Review
- Elicitation of Innate Immunity by a Bacterial Volatile 2-Nonanone at Levels below Detection Limit in Tomato Rhizosphere.Molecules and cells · 2022Article
- Effects of Volatile Organic Compounds Produced byJournal of fungi (Basel, Switzerland) · 2022Article
- Microbial volatile organic compounds in intra-kingdom and inter-kingdom interactions.Nature reviews. Microbiology · 2021Review
- Genome Features ofGenes · 2021Article
- Dissection of plant microbiota and plant-microbiome interactions.Journal of microbiology (Seoul, Korea) · 2021Review
- Volatile Compounds FromFrontiers in microbiology · 2021Article
- Article
- Sixty-One Volatiles Have Phylogenetic Signals Across Bacterial Domain and Fungal Kingdom.Frontiers in microbiology · 2020Article
- Antifungal Effects of Volatiles Produced byFrontiers in microbiology · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors at 4 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Airborne chemical signals emitted by bacteria influence the behavior of other bacteria and plants. We present an overview of in vitro methods for evaluating bacterial and plant responses to bacterial volatile compounds (BVCs). Three types of equipment have been used to physically separate the bacterial test strains from either other bacterial strains or plants (in our laboratory we use either Arabidopsis or tobacco plant seedlings): a Petri dish containing two compartments (BI Petri dish); two Petri dishes connected with tubing; and a microtiter-based assay. The optimized procedure for the BI Petri dish system is described in this protocol and can be widely used for elucidation of potential function in interactions between diverse microbes and those plant and chemical volatiles emitted by bacteria that are most likely to mediate bacterial or plant responses to BVCs. We also describe a procedure for metabolome-based BVC profiling via dynamic (i.e., continuous airflow) or static headspace sampling using solid-phase microextraction (SPME). Using both these procedures, bacteria-bacteria communications and bacteria-plant interactions mediated by BVCs can be rapidly investigated (within 1-4 weeks).
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.