Evidence map›Paper›PMID 28615632›Full record

ArticleScientific reports2017

Genome-wide analysis suggests a differential microRNA signature associated with normal and diabetic human corneal limbus.

Mangesh Kulkarni, Aleksandra Leszczynska, Gabbie Wei, Michael A Winkler, Jie Tang, Vincent A Funari, Nan Deng, Zhenqiu Liu, Vasu Punj, Sophie X Deng and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  13. Elevated Opioid Growth Factor Alters the Limbus in Type 1 Diabetic Rats.Journal of diabetes and clinical research · 2023
    Article
  14. Article
  15. Review
  16. Article
  17. Eph signaling is regulated by miRNA-210: Implications for corneal epithelial repair.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  18. Review
  19. Regulation of Limbal Epithelial Stem Cells: Importance of the Niche.International journal of molecular sciences · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Mangesh KulkarniBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Aleksandra LeszczynskaBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Gabbie WeiBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Michael A WinklerBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Jie TangGenomics Core, Cedars-Sinai Medical Center, Los Angeles, California, USA.ORCID 0000-0002-3991-2539
Vincent A FunariGenomics Core, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Nan DengSamuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Zhenqiu LiuSamuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Vasu PunjKeck School of Medicine, University of Southern California, Los Angeles, California, USA.
Sophie X DengDavid Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, USA.
Alexander V LjubimovBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Mehrnoosh SaghizadehBiomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA. ghiamm@cshs.org.
Cedars-Sinai Medical Center · USUniversity of California, Los Angeles · USUniversity of Southern California · US

Funding

Mechanisms of Epithelial Alterations in Diabetic CorneaR01EY013431 · NEI · CEDARS-SINAI MEDICAL CENTER · PI Alexander V Ljubimov · 2001 to 2026
$11.3M
The Role of MicroRNAs in Normal and Diseased Corneal Epithelial HomeostasisR01EY025377 · NEI · CEDARS-SINAI MEDICAL CENTER · PI Mehrnoosh Saghizadeh Ghiam · 2015 to 2026
$4.3M
Regulation of Limbal Niche in Normal and Diabetic Cornea by Extracellular VesiclesR01EY029829 · NEI · CEDARS-SINAI MEDICAL CENTER · PI GHIAM, MEHRNOOSH SAGHIZADEH · 2019 to 2023
$2.6M
Wnt5a, a New Diabetic Corneal Marker Related to Wound HealingR01EY031377 · NEI · CEDARS-SINAI MEDICAL CENTER · PI LJUBIMOV, ALEXANDER V · 2020 to 2024
$2.1M
The Role and Mechanisms of microRNAs in Diabetic CorneaR21EY022771 · NEI · CEDARS-SINAI MEDICAL CENTER · PI GHIAM, MEHRNOOSH SAGHIZADEH · 2012 to 2013
$443k
NEI NIH HHS R01 EY013431NEI NIH HHS R01 EY025377NEI NIH HHS R01 EY029829NEI NIH HHS R01 EY031377NEI NIH HHS R21 EY022771
6 · The paper itself

Abstract

Small non-coding RNAs, in particular microRNAs (miRNAs), regulate fine-tuning of gene expression and can impact a wide range of biological processes. However, their roles in normal and diseased limbal epithelial stem cells (LESC) remain unknown. Using deep sequencing analysis, we investigated miRNA expression profiles in central and limbal regions of normal and diabetic human corneas. We identified differentially expressed miRNAs in limbus vs. central cornea in normal and diabetic (DM) corneas including both type 1 (T1DM/IDDM) and type 2 (T2DM/NIDDM) diabetes. Some miRNAs such as miR-10b that was upregulated in limbus vs. central cornea and in diabetic vs. normal limbus also showed significant increase in T1DM vs. T2DM limbus. Overexpression of miR-10b increased Ki-67 staining in human organ-cultured corneas and proliferation rate in cultured corneal epithelial cells. MiR-10b transfected human organ-cultured corneas showed downregulation of PAX6 and DKK1 and upregulation of keratin 17 protein expression levels. In summary, we report for the first time differential miRNA signatures of T1DM and T2DM corneal limbus harboring LESC and show that miR-10b could be involved in the LESC maintenance and/or their early differentiation. Furthermore, miR-10b upregulation may be an important mechanism of corneal diabetic alterations especially in the T1DM patients.

Indexed as

Genome-Wide Association StudyMicroRNAsTranscriptomeAdultAgedAged, 80 and overBiomarkersCells, CulturedComputational BiologyDiabetes MellitusDiabetes Mellitus, Type 1Diabetes Mellitus, Type 2FemaleGene Expression ProfilingGene Expression RegulationGene OntologyBiomarkersMicroRNAs

Identifiers

PMID28615632
PMCPMC5471258
OpenAlexW2623350679

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.