Evidence map›Paper›PMID 28615207›Full record

ArticleJournal of virology2017

Allosteric HIV-1 Integrase Inhibitors Lead to Premature Degradation of the Viral RNA Genome and Integrase in Target Cells.

Michaela K Madison, Dana Q Lawson, Jennifer Elliott, Ayşe Naz Ozantürk, Pratibha C Koneru, Dana Townsend, Manel Errando, Mamuka Kvaratskhelia, Sebla B Kutluay

Abstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Michaela K MadisonDepartment of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Dana Q LawsonDepartment of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Jennifer ElliottDepartment of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Ayşe Naz OzantürkDepartment of Molecular Biology and Genetics, Bilkent University, Ankara, Turkey.
Pratibha C KoneruCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Dana TownsendDepartment of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Manel ErrandoDepartment of Physics, Washington University, Saint Louis, Missouri, USA.
Mamuka KvaratskheliaCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Sebla B KutluayDepartment of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA kutluay@wustl.edu.

Funding

The Center for HIV RNA Studies (CRNA)P50GM103297 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TELESNITSKY, ALICE · 2012 to 2016
$21.7M
Structure and function of HIV-1 integraseR01AI062520 · NIAID · UNIVERSITY OF COLORADO DENVER · PI KVARATSKHELIA, MAMUKA · 2006 to 2020
$5.3M
REGULATION AND TARGETING OF HIV-1 INTEGRASE-RNA INTERACTIONSR01AI150497 · NIAID · WASHINGTON UNIVERSITY · PI Sebla B. Kutluay · 2020 to 2026
$2.9M
Multimeric HIV-1 Integrase InhibitorsR01AI110310 · NIAID · UNIVERSITY OF COLORADO DENVER · PI KVARATSKHELIA, MAMUKA · 2014 to 2018
$2.2M
REGULATION AND TARGETING OF HIV-1 INTEGRASE-RNA INTERACTIONSR01GM122458 · NIGMS · WASHINGTON UNIVERSITY · PI KUTLUAY, SEBLA B. · 2017 to 2019
$961k
Identification of novel protein-RNA interactions during HIV-1 particle genesisK22AI116258 · NIAID · WASHINGTON UNIVERSITY · PI KUTLUAY, SEBLA B. · 2015 to 2016
$270k
NIAID NIH HHS K22 AI116258NIAID NIH HHS R01 AI062520NIAID NIH HHS R01 AI110310NIAID NIH HHS R01 AI150497NIGMS NIH HHS P50 GM103297NIGMS NIH HHS R01 GM122458
6 · The paper itself

Abstract

Recent evidence indicates that inhibition of HIV-1 integrase (IN) binding to the viral RNA genome by allosteric integrase inhibitors (ALLINIs) or through mutations within IN yields aberrant particles in which the viral ribonucleoprotein complexes (vRNPs) are eccentrically localized outside the capsid lattice. These particles are noninfectious and are blocked at an early reverse transcription stage in target cells. However, the basis of this reverse transcription defect is unknown. Here, we show that the viral RNA genome and IN from ALLINI-treated virions are prematurely degraded in target cells, whereas reverse transcriptase remains active and stably associated with the capsid lattice. The aberrantly shaped cores in ALLINI-treated particles can efficiently saturate and be degraded by a restricting TRIM5 protein, indicating that they are still composed of capsid proteins arranged in a hexagonal lattice. Notably, the fates of viral core components follow a similar pattern in cells infected with eccentric particles generated by mutations within IN that inhibit its binding to the viral RNA genome. We propose that IN-RNA interactions allow packaging of both the viral RNA genome and IN within the protective capsid lattice to ensure subsequent reverse transcription and productive infection in target cells. Conversely, disruption of these interactions by ALLINIs or mutations in IN leads to premature degradation of both the viral RNA genome and IN, as well as the spatial separation of reverse transcriptase from the viral genome during early steps of infection.

Indexed as

Genome, ViralAnimalsAntiviral Restriction FactorsCapsidCarrier ProteinsCHO CellsCricetulusHEK293 CellsHIV-1HIV IntegraseHIV Integrase InhibitorsHIV Reverse TranscriptaseHumansRNA, ViralTripartite Motif ProteinsUbiquitin-Protein LigasesAntiviral Restriction FactorsCarrier ProteinsHIV IntegraseHIV Integrase InhibitorsHIV Reverse Transcriptasep31 integrase protein, Human immunodeficiency virus 1RNA, ViralTRIM5 protein, humanTripartite Motif ProteinsUbiquitin-Protein LigasesALLINIscapsidHIV-1integrasematurationprotein-RNA interactionreverse transcriptaseRNA packagingTRIM5

Identifiers

PMID28615207
PMCPMC5553177

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.