Evidence map›Paper›PMID 28614917›Full record

ArticleMolecules and cells2017

Cell Death-Associated Ribosomal RNA Cleavage in Postmortem Tissues and Its Forensic Applications.

Ji Yeon Kim, Yunmi Kim, Hyo Kyeong Cha, Hye Young Lim, Hyungsub Kim, Sooyoung Chung, Juck-Joon Hwang, Seong Hwan Park, Gi Hoon Son

Open access · diamondAbstract read
In one paragraph

Article in Molecules and cells, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Characteristics of the Cytotoxicity ofInternational journal of molecular sciences · 2022
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Ji Yeon KimDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Yunmi KimDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Hyo Kyeong ChaDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Hye Young LimDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Hyungsub KimDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Sooyoung ChungDepartment of Brain and Cognitive Sciences, Scranton College, Ewha Womans University, Seoul 03760, Korea.
Juck-Joon HwangDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Seong Hwan ParkDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Gi Hoon SonDepartment of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea.
Korea University · KREwha Womans University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Estimation of postmortem interval (PMI) is a key issue in the field of forensic pathology. With the availability of quantitative analysis of RNA levels in postmortem tissues, several studies have assessed the postmortem degradation of constitutively expressed RNA species to estimate PMI. However, conventional RNA quantification as well as biochemical and physiological changes employed thus far have limitations related to standardization or normalization. The present study focuses on an interesting feature of the subdomains of certain RNA species, in which they are site-specifically cleaved during apoptotic cell death. We found that the D8 divergent domain of ribosomal RNA (rRNA) bearing cell death-related cleavage sites was rapidly removed during postmortem RNA degradation. In contrast to the fragile domain, the 5' terminal region of 28S rRNA was remarkably stable during the postmortem period. Importantly, the differences in the degradation rates between the two domains in mammalian 28S rRNA were highly proportional to increasing PMI with a significant linear correlation observed in mice as well as human autopsy tissues. In conclusion, we demonstrate that comparison of the degradation rates between domains of a single RNA species provides quantitative information on postmortem degradation states, which can be applied for the estimation of PMI.

Indexed as

ApoptosisPostmortem ChangesRNA CleavageRNA Stability5' Untranslated RegionsAnimalsAutopsyBrainForensic PathologyHumansLinear ModelsLiverLungMaleMiceMice, Inbred C57BL5' Untranslated RegionsRNA, Ribosomal, 28S28S ribosomal RNA (rRNA)cell death-associated RNA cleavagepostmortem interval (PMI)RNA degradation

Identifiers

PMID28614917
PMCPMC5523017
OpenAlexW2766406386

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.