Evidence map›Paper›PMID 28611809›Full record

ArticleFrontiers in plant science2017

Proteomic Analysis of Lipid Droplets from Arabidopsis Aging Leaves Brings New Insight into Their Biogenesis and Functions.

Lysiane Brocard, Françoise Immel, Denis Coulon, Nicolas Esnay, Karine Tuphile, Stéphanie Pascal, Stéphane Claverol, Laëtitia Fouillen, Jean-Jacques Bessoule, Claire Bréhélin

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 105 citations in OpenAlex.

  1. Abiotic Stress in Crop Production.International journal of molecular sciences · 2023
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Lipid droplets inFrontiers in plant science · 2024
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Lysiane BrocardPlant Imaging Platform, Bordeaux Imaging Center, UMS 3420 Centre National de la Recherche Scientifique, US4 Institut National de la Santé et de la Recherche Médicale, University of BordeauxBordeaux, France.
Françoise ImmelLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Denis CoulonLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Nicolas EsnayLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Karine TuphileLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Stéphanie PascalLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Stéphane ClaverolProteome Platform, Functional Genomic Center of Bordeaux, University of BordeauxBordeaux, France.
Laëtitia FouillenLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Jean-Jacques BessouleLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Claire BréhélinLaboratory of Membrane Biogenesis, Centre National de la Recherche Scientifique, UMR 5200Villenave d'Ornon, France.
Centre National de la Recherche Scientifique · FRUniversité de Bordeaux · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipid droplets (LDs) are cell compartments specialized for oil storage. Although their role and biogenesis are relatively well documented in seeds, little is known about their composition, structure and function in senescing leaves where they also accumulate. Here, we used a label free quantitative mass spectrometry approach to define the LD proteome of aging Arabidopsis leaves. We found that its composition is highly different from that of seed/cotyledon and identified 28 proteins including 9 enzymes of the secondary metabolism pathways involved in plant defense response. With the exception of the TRIGALACTOSYLDIACYLGLYCEROL2 protein, we did not identify enzymes implicated in lipid metabolism, suggesting that growth of leaf LDs does not occur by local lipid synthesis but rather through contact sites with the endoplasmic reticulum (ER) or other membranes. The two most abundant proteins of the leaf LDs are the CALEOSIN3 and the SMALL RUBBER PARTICLE1 (AtSRP1); both proteins have structural functions and participate in plant response to stress. CALEOSIN3 and AtSRP1 are part of larger protein families, yet no other members were enriched in the LD proteome suggesting a specific role of both proteins in aging leaves. We thus examined the function of AtSRP1 at this developmental stage and found that

Indexed as

electron tomographyER contact sitelabel free proteomicsleaf senescencelipid dropletsecondary metabolismSmall rubber particle protein1ultrastructure

Identifiers

PMID28611809
PMCPMC5447075
OpenAlexW2617621484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.