Evidence map›Paper›PMID 28611446›Full record

ArticleScientific reports2017

Genome-wide analysis of gene expression and protein secretion of Babesia canis during virulent infection identifies potential pathogenicity factors.

Ramon M Eichenberger, Chandra Ramakrishnan, Giancarlo Russo, Peter Deplazes, Adrian B Hehl

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 47 citations in OpenAlex.

  1. Microbiology spectrum · 2023
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  2. Review
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  4. Comparison of high throughput RNA sequences betweenFrontiers in cellular and infection microbiology · 2022
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  5. Review
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  12. Mechanisms Involved in the Persistence ofPathogens (Basel, Switzerland) · 2019
    Review
  13. Secretory Nanoparticles ofNanomaterials (Basel, Switzerland) · 2019
    Article
  14. Article
  15. Evaluation ofFrontiers in veterinary science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ramon M EichenbergerInstitute of Parasitology, University of Zurich, Zurich, Switzerland.
Chandra RamakrishnanInstitute of Parasitology, University of Zurich, Zurich, Switzerland.
Giancarlo RussoFunctional Genomics Center Zurich, Zurich, Switzerland.
Peter DeplazesInstitute of Parasitology, University of Zurich, Zurich, Switzerland.
Adrian B HehlInstitute of Parasitology, University of Zurich, Zurich, Switzerland. adrian.hehl@uzh.ch.
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infections of dogs with virulent strains of Babesia canis are characterized by rapid onset and high mortality, comparable to complicated human malaria. As in other apicomplexan parasites, most Babesia virulence factors responsible for survival and pathogenicity are secreted to the host cell surface and beyond where they remodel and biochemically modify the infected cell interacting with host proteins in a very specific manner. Here, we investigated factors secreted by B. canis during acute infections in dogs and report on in silico predictions and experimental analysis of the parasite's exportome. As a backdrop, we generated a fully annotated B. canis genome sequence of a virulent Hungarian field isolate (strain BcH-CHIPZ) underpinned by extensive genome-wide RNA-seq analysis. We find evidence for conserved factors in apicomplexan hemoparasites involved in immune-evasion (e.g. VESA-protein family), proteins secreted across the iRBC membrane into the host bloodstream (e.g. SA- and Bc28 protein families), potential moonlighting proteins (e.g. profilin and histones), and uncharacterized antigens present during acute crisis in dogs. The combined data provides a first predicted and partially validated set of potential virulence factors exported during fatal infections, which can be exploited for urgently needed innovative intervention strategies aimed at facilitating diagnosis and management of canine babesiosis.

Indexed as

Gene Expression RegulationGenome, ProtozoanAnimalsBabesiaBabesiosisDog DiseasesDogsErythrocytesPhylogenyProteomicsProtozoan ProteinsTranscriptomeVirulence FactorsProtozoan ProteinsVirulence Factors

Identifiers

PMID28611446
PMCPMC5469757
OpenAlexW2622455503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.