Evidence map›Paper›PMID 28609431›Full record

ArticlePediatric research2018

Polymorphisms in urea cycle enzyme genes are associated with persistent pulmonary hypertension of the newborn.

Dinushan C Kaluarachchi, Caitlin J Smith, Jonathan M Klein, Jeffrey C Murray, John M Dagle, Kelli K Ryckman

Open access · bronzeAbstract read
In one paragraph

Article in Pediatric research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Metabolic differences among newborns born to mothers with a history of leukemia or lymphoma.The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. CPS1: Looking at an ancient enzyme in a modern light.Molecular genetics and metabolism · 2020
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Inborn errors of metabolism in the 21Annals of translational medicine · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dinushan C KaluarachchiDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Caitlin J SmithDepartment of Epidemiology, College of Public Health, University of Iowa, Iowa City, Iowa.
Jonathan M KleinDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Jeffrey C MurrayDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
John M DagleDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Kelli K RyckmanDepartment of Epidemiology, College of Public Health, University of Iowa, Iowa City, Iowa.
University of Iowa · US

Funding

Integrated Genomic and Metabolomic Profiles in Newborn InfantsR00HD065786 · NICHD · UNIVERSITY OF IOWA · PI RYCKMAN, KELLI K. · 2013 to 2015
$734k
Integrated Genomic and Metabolomic Profiles in Newborn InfantsK99HD065786 · NICHD · UNIVERSITY OF IOWA · PI RYCKMAN, KELLI K. · 2010 to 2011
$156k
NICHD NIH HHS K99 HD065786NICHD NIH HHS R00 HD065786
6 · The paper itself

Abstract

BackgroundPersistent pulmonary hypertension of the newborn (PPHN) is characterized by elevated pulmonary vascular resistance. Endogenous nitric oxide is critical for regulation of pulmonary vascular resistance. Nitric oxide is generated from L-arginine, supplied by the urea cycle (UC). We hypothesized that polymorphisms in UC enzyme genes and low concentrations of UC intermediates are associated with PPHN.MethodsWe performed a family-based candidate gene analysis to study 48 single-nucleotide polymorphisms (SNPs) in six UC enzyme genes. Genotyping was carried out in 94 infants with PPHN and their parents. We also performed a case-control analysis of 32 cases with PPHN and 64 controls to identify an association between amino-acid levels on initial newborn screening and PPHN.ResultsThree SNPs (rs41272673, rs4399666, and rs2287599) in carbamoyl phosphate synthase 1 gene (CPS1) showed a significant association with PPHN (P=0.02). Tyrosine levels were significantly lower (P=0.003) and phenylalanine levels were significantly higher (P=0.01) in cases with PPHN. There was no difference in the arginine or citrulline levels between the two groups.ConclusionsThis study suggests an association (P<0.05) between SNPs in CPS1 and PPHN. These findings warrant further replication in larger cohorts of patients.

Indexed as

Polymorphism, Single NucleotideArginineCarbamoyl-Phosphate Synthase (Ammonia)Case-Control StudiesFemaleGenotypeHaplotypesHeterozygoteHumansInfant, NewbornIntensive Care, NeonatalMaleModels, BiologicalNitric OxidePersistent Fetal Circulation SyndromeRegistriesArginineCarbamoyl-Phosphate Synthase (Ammonia)Nitric OxideUrea

Identifiers

PMID28609431
PMCPMC5811332
OpenAlexW2626417522

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.