Evidence map›Paper›PMID 28608265›Full record

ArticleFamilial cancer2018

Constitutional mismatch repair deficiency and Lynch syndrome among consecutive Arab Bedouins with colorectal cancer in Israel.

Naim Abu Freha, Yaara Leibovici Weissman, Alexander Fich, Inbal Barnes Kedar, Marisa Halpern, Ignacio Sztarkier, Doron M Behar, Orly Arbib Sneh, Alex Vilkin, Hagit N Baris and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Familial cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Comparison of microsatellite status detection methods in colorectal carcinoma.International journal of clinical and experimental pathology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Naim Abu FrehaDepartment of Gastroenterology, Soroka Medical Center, Beer-Sheva, Israel.
Yaara Leibovici WeissmanDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel.
Alexander FichDepartment of Gastroenterology, Soroka Medical Center, Beer-Sheva, Israel.
Inbal Barnes KedarThe Raphael Recanati Genetics Institute, Rabin Medical Center, Petah Tikva, Israel.
Marisa HalpernDepartment of Pathology, Hasharon Medical Center, Petah-Tikva, Israel.
Ignacio SztarkierDepartment of Pathology, Soroka Medical Center, Beer-Sheva, Israel.
Doron M BeharGenomics Research Center, Gene by Gene, Houston, TX, USA.
Orly Arbib SnehDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel.
Alex VilkinDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel.
Hagit N BarisThe Genetics Institute, Rambam Health Care Campus and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.
Rachel GingoldDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel.
Flavio LejbkowiczThe Clalit Health Services, Personalized Genomic Service, Carmel, Haifa, Israel.
Yaron NivDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel.
Yael GoldbergThe Raphael Recanati Genetics Institute, Rabin Medical Center, Petah Tikva, Israel.
Zohar LeviDepartment of Gastroenterology, Beilinson Medical Center, Petah Tikva, Israel. Zohar.levi.gastroenterology@gmail.com.
Rabin Medical Center · ILSoroka Medical Center · ILClalit Health Services · ILID Genomics (United States) · USLev Hasharon Hospital · ILTechnion – Israel Institute of Technology · ILTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We assessed the molecular characteristics and the frequency of mutations in mismatch-repair genes among Bedouin patients with colorectal cancer (CRC) in Israel. Bedouin patients with a diagnosis of CRC at a major hospital in the southern part of Israel were deemed eligible for this study. The primary screening method was immunohistochemical staining for mismatch-repair proteins (MLH1, MSH2, MSH6, and PMS2). For subjects with abnormal immunohistochemical staining, we performed microsatellite instability (MSI) analyses, and for tumors with a loss of MLH1 expression we also performed BRAF testing. In MSI high cases we searched further for germline mutations. Of the 24 patients enrolled, four subjects (16.7%) had MSI high tumors: one subject was found to harbor a biallelic PMS2 mutation, one subject had Lynch syndrome (LS) with MSH6 mutation and two subjects had a loss of MLH1/PMS2 proteins/BRAF

Indexed as

AdultArabsBiomarkers, TumorBrain NeoplasmsColorectal NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisFemaleFollow-Up StudiesGenetic TestingGerm-Line MutationHumansIsraelMaleMiddle AgedNeoplastic Syndromes, HereditaryPrevalenceBiomarkers, TumorBedouinColorectal cancerConstitutional mismatch repair deficiencyLynch syndromeMismatch repair protein

Identifiers

PMID28608265
OpenAlexW2624986850

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.