ArticlePeerJ2017
Ecophylogeny of the endospheric root fungal microbiome of co-occurring
Article in PeerJ, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 48 citations in OpenAlex.
- Bacterial and Fungal Communities in Old Vines and Their Progeny: Insights into Microbial Inheritance Through Mass Selection.Microorganisms · 2026Article
- Factors affecting the production of sugarcane yield and sucrose accumulation: suggested potential biological solutions.Frontiers in plant science · 2024Review
- New Species ofJournal of fungi (Basel, Switzerland) · 2023Article
- Evaluating the hologenome concept by analyzing the root-endosphere microbiota of chimeric plants.iScience · 2023Article
- Metabarcoding of fungal assemblages in Vaccinium myrtillus endosphere suggests colonization of above-ground organs by some ericoid mycorrhizal and DSE fungi.Scientific reports · 2022Article
- EndophyticJournal of fungi (Basel, Switzerland) · 2022Article
- Abundance, diversity, and composition of root-associated microbial communities varied with tall fescue cultivars under water deficit.Frontiers in microbiology · 2022Article
- Differentiation of endospheric microbiota in ancient and modern wheat cultivar roots.Plant-environment interactions (Hoboken, N.J.) · 2021Article
- Culture-Based and Culture-Independent Assessments of Endophytic Fungal Diversity in Aquatic Plants in Southwest China.Frontiers in fungal biology · 2021Article
- Implications of endophytic microbiota inBioengineered · 2020Review
- Effect of Inorganic N Top Dressing andFrontiers in plant science · 2020Article
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- A microorganisms' journey between plant generations.Microbiome · 2018Article
- Microbial interactions within the plant holobiont.Microbiome · 2018Review
Corrections and comments
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Authors and funding
6 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundWithin the root endosphere, fungi are known to be important for plant nutrition and resistance to stresses. However, description and understanding of the rules governing community assembly in the fungal fraction of the plant microbiome remains scarce.
methodsWe used an innovative DNA- and RNA-based analysis of co-extracted nucleic acids to reveal the complexity of the fungal community colonizing the roots of an
resultsFungal communities were highly diverse. Only ∼1.5% of the 635 OTUs detected were shared by all individuals, however these accounted for 33% of the sequence number. The endophytic fungal communities in plant roots exhibit phylogenetic clustering that can be explained by a plant host effect acting as environmental filter. The ' DISCUSSION: These results suggest that environmental filtering by the host plant favours the co-existence of related and similar OTUs within the Basidiomycota community assembly, whereas the Ascomycota and Glomeromycota communities seem to be impacted by competitive interactions which promote the co-existence of phylogenetically related but ecologically dissimilar OTUs.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.