Evidence map›Paper›PMID 28607179›Full record

ArticleGenes & development2017

PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes.

Yadira M Soto-Feliciano, Jordan M E Bartlebaugh, Yunpeng Liu, Francisco J Sánchez-Rivera, Arjun Bhutkar, Abraham S Weintraub, Jason D Buenrostro, Christine S Cheng, Aviv Regev, Tyler E Jacks and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. MultiplexedbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Article
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  13. PHF6 suppresses self-renewal of leukemic stem cells in AML.bioRxiv : the preprint server for biology · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Frontiers in oncology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Yadira M Soto-FelicianoDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Jordan M E BartlebaughDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Yunpeng LiuDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Francisco J Sánchez-RiveraDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Arjun BhutkarDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Abraham S WeintraubDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Jason D BuenrostroBroad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02142, USA.
Christine S ChengBroad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02142, USA.
Aviv RegevDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Tyler E JacksDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Richard A YoungDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Michael T HemannDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA.
Massachusetts Institute of Technology · USBroad Institute · USHoward Hughes Medical Institute · USWhitehead Institute for Biomedical Research · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MATTHEW G. VANDER HEIDEN · 1985 to 2026
$93.9M
PRE-DOCTORAL TRAINING IN THE BIOLOGICAL SCIENCEST32GM007287 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BELL, STEPHEN P., KEATING, AMY E · 1985 to 2019
$40.8M
Understanding mechanisms of transcriptional regulation by chromatin adaptor proteinsK99GM140265 · NIGMS · ROCKEFELLER UNIVERSITY · PI SOTO-FELICIANO, YADIRA M · 2021 to 2021
$100k
Targeting tumor-microenvironment interaction to overcome leukemia chemoresistanceF31CA183405 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SOTO-FELICIANO, YADIRA M · 2014 to 2015
$68k
NCI NIH HHS F31 CA183405NCI NIH HHS P30 CA014051NIGMS NIH HHS K99 GM140265NIGMS NIH HHS T32 GM007287
6 · The paper itself

Abstract

Developmental and lineage plasticity have been observed in numerous malignancies and have been correlated with tumor progression and drug resistance. However, little is known about the molecular mechanisms that enable such plasticity to occur. Here, we describe the function of the plant homeodomain finger protein 6 (PHF6) in leukemia and define its role in regulating chromatin accessibility to lineage-specific transcription factors. We show that loss of

Indexed as

Gene Expression Regulation, NeoplasticAnimalsCell LineageCell Line, TumorChromatinDrug Resistance, NeoplasmGene Knockout TechniquesHomeodomain ProteinsLeukemia, B-CellLymphoma, Non-HodgkinMiceMice, Inbred C57BLPhenotypeRepressor ProteinsSignal TransductionChromatinHomeodomain ProteinsPhf6 protein, mouseRepressor Proteinschromatin regulationleukemialineage maintenancenucleosome positioningphenotypic plasticityPHF6

Identifiers

PMID28607179
PMCPMC5495126
OpenAlexW2626444771

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.