Evidence map›Paper›PMID 28606943›Full record

ArticleRNA (New York, N.Y.)2017

Role of the terminator hairpin in the biogenesis of functional Hfq-binding sRNAs.

Teppei Morita, Ryo Nishino, Hiroji Aiba

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Teppei MoritaFaculty of Pharmaceutical Sciences, Suzuka University of Medical Sciences, Suzuka, Mie, 513-8670, Japan.
Ryo NishinoFaculty of Pharmaceutical Sciences, Suzuka University of Medical Sciences, Suzuka, Mie, 513-8670, Japan.
Hiroji AibaFaculty of Pharmaceutical Sciences, Suzuka University of Medical Sciences, Suzuka, Mie, 513-8670, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rho-independent transcription terminators of the genes encoding bacterial Hfq-binding sRNAs possess a set of seven or more T residues at the 3' end, as noted in previous studies. Here, we have studied the role of the terminator hairpin in the biogenesis of sRNAs focusing on SgrS and RyhB in

Indexed as

Inverted Repeat SequencesTerminator Regions, Genetic3' Untranslated RegionsBase SequenceEscherichia coliGlucoseHost Factor 1 ProteinPhosphatesPoly UProtein BindingRNARNA, BacterialRNA, MessengerRNA StabilityStress, PhysiologicalTranscription, Genetic3' Untranslated RegionsGlucoseHost Factor 1 ProteinPhosphatesPoly URNARNA, BacterialRNA, Messengerbacterial sRNAHfqpremature terminationRho-independent terminatorRNA hairpin

Identifiers

PMID28606943
PMCPMC5558911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.