Evidence map›Paper›PMID 28606792›Full record

ArticleJournal of microbiological methods2017

Improved method for rapid and accurate isolation and identification of Streptococcus mutans and Streptococcus sobrinus from human plaque samples.

Alissa L Villhauer, David J Lynch, David R Drake

Abstract read
In one paragraph

Article in Journal of microbiological methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Evaluation ofInternational journal of clinical pediatric dentistry · 2023
    Article
  5. In vivo Microbial Diversity Analysis on Different Surfaces of Dental Restorative Materials via 16S rDNA Sequencing.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Alissa L VillhauerIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, 801 Newton Rd, Iowa City, IA, USA.
David J LynchIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, 801 Newton Rd, Iowa City, IA, USA.
David R DrakeIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, 801 Newton Rd, Iowa City, IA, USA. Electronic address: David-Drake@uiowa.edu.
University of Iowa · US

Funding

University of Iowa Institutional Training Program in Oral Health ResearchT90DE023520 · NIDCR · UNIVERSITY OF IOWA · PI STEVEN M. LEVY · 2013 to 2026
$5.6M
Streptococcus mutans and Dental Caries in Native American ChildrenR01DE017736 · NIDCR · UNIVERSITY OF IOWA · PI DRAKE, DAVID RAY · 2007 to 2011
$3.2M
NIDCR NIH HHS R01 DE017736NIDCR NIH HHS T90 DE023520
6 · The paper itself

Abstract

Mutans streptococci (MS), specifically Streptococcus mutans (SM) and Streptococcus sobrinus (SS), are bacterial species frequently targeted for investigation due to their role in the etiology of dental caries. Differentiation of S. mutans and S. sobrinus is an essential part of exploring the role of these organisms in disease progression and the impact of the presence of either/both on a subject's caries experience. Of vital importance to the study of these organisms is an identification protocol that allows us to distinguish between the two species in an easy, accurate, and timely manner. While conducting a 5-year birth cohort study in a Northern Plains American Indian tribe, the need for a more rapid procedure for isolating and identifying high volumes of MS was recognized. We report here on the development of an accurate and rapid method for MS identification. Accuracy, ease of use, and material and time requirements for morphological differentiation on selective agar, biochemical tests, and various combinations of PCR primers were compared. The final protocol included preliminary identification based on colony morphology followed by PCR confirmation of species identification using primers targeting regions of the glucosyltransferase (gtf) genes of SM and SS. This method of isolation and identification was found to be highly accurate, more rapid than the previous methodology used, and easily learned. It resulted in more efficient use of both time and material resources.

Indexed as

Cohort StudiesColony Count, MicrobialDental CariesDental PlaqueDNA, BacterialDNA PrimersFemaleGlucosyltransferasesHumansPolymerase Chain ReactionSalivaStreptococcus mutansStreptococcus sobrinusTime FactorsDNA, BacterialDNA PrimersGlucosyltransferasesDNA extractionMutans streptococciPCRRapid identificationStreptococcus mutansStreptococcus sobrinus

Identifiers

PMID28606792
PMCPMC5988259
OpenAlexW2623405865

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.