Evidence map›Paper›PMID 28605562›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2017

Microorganisms Associated With Pneumonia in Children <5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study.

Thomas Bénet, Valentina Sánchez Picot, Mélina Messaoudi, Monidarin Chou, Tekchheng Eap, Jianwei Wang, Kunling Shen, Jean-William Pape, Vanessa Rouzier, Shally Awasthi and 17 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 11 pooled it
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 11 syntheses or guidelines pooled it, 168 citations in OpenAlex.

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  14. Causes of fever in primary care in Southeast Asia and the performance of C-reactive protein in discriminating bacterial from viral pathogens.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020
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  17. Genomic analysis ofbioRxiv : the preprint server for biology · 2026
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56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 19 institutions in 12 countries.

Thomas BénetEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Valentina Sánchez PicotEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Mélina MessaoudiEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Monidarin ChouFaculty of Pharmacy, University of Health Sciences.
Tekchheng EapDepartment of Pneumology, National Pediatric Hospital, Phnom Penh, Cambodia.
Jianwei WangMOH Key Laboratory of Systems Biology of Pathogens and Dr Christophe Mérieux Laboratory, Fondation Mérieux, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, China.
Kunling ShenKey Laboratory of Major Diseases in Children and National Key Discipline of Pediatrics, Capital Medical University, Ministry of Education, Beijing Pediatric Research Institute, Beijing Children's Hospital, China.
Jean-William PapeCentres GHESKIO (Groupe Haïtien d'Etude du Sarcome de Kaposi et des Infections Opportunistes), Port-au-Prince, Haiti.
Vanessa RouzierCentres GHESKIO (Groupe Haïtien d'Etude du Sarcome de Kaposi et des Infections Opportunistes), Port-au-Prince, Haiti.
Shally AwasthiChatrapati Shahu Ji Maharaj Medical University, Lucknow.
Nitin PandeyChatrapati Shahu Ji Maharaj Medical University, Lucknow.
Ashish BavdekarKEM Hospital Research Center, Pune, India.
Sonali SanghaviKEM Hospital Research Center, Pune, India.
Annick Robinson
Mala Rakoto-AndrianariveloFondation Mérieux, Centre d'Infectiologie Charles Mérieux, Antananarivo, Madagascar.
Maryam SyllaGabriel Touré Hospital.
Souleymane DialloCentre d'Infectiologie Charles Mérieux, Bamako, Mali.
Pagbajabyn NymadawaMongolian Academy of Medical Sciences.
Nymadawaagiin NaranbatMongolian Academy of Medical Sciences.
Graciela RussomandoResearch Institute of Health, Asuncion.
Wilma BasualdoHospital Pediátrico Niños de Acosta Ñu, San Lorenzo, Paraguay.
Florence Komurian-PradelEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Hubert EndtzEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Philippe VanhemsEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Gláucia Paranhos-BaccalàEmerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, INSERM U1111, CNRS UMR 5308, ENS de Lyon, UCBL1.
Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network
Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network
Gheskio Centers · HTCentre International de Recherche en Infectiologie · FRCentre National de la Recherche Scientifique · FRCollege of Medicine & JNM Hospital · INÉcole Normale Supérieure de Lyon · FRKing George's Medical University · INCapital Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNFondation Mérieux · FRHôpital de la Tour · CHHôpital Femme Mère Enfant · FRHospital del Niño · PAInserm · FRMongolian Academy of Sciences · MNMongolian National University of Medical Sciences · MNNational University of Management · KHResearch Institute of Health Sciences · ESUniversité Claude Bernard Lyon 1 · FRUniversity of Health Sciences · SO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged <5 years in developing and emerging countries. Methods: A multicenter, case-control study by the GABRIEL (Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries) network was conducted between 2010 and 2014 in Cambodia, China, Haiti, India (2 sites), Madagascar, Mali, Mongolia, and Paraguay. Cases were hospitalized children with radiologically confirmed pneumonia; controls were children from the same setting without any features suggestive of pneumonia. Nasopharyngeal swabs were collected from all subjects; 19 viruses and 5 bacteria were identified by reverse-transcription polymerase chain reaction. Associations between microorganisms and pneumonia were quantified by calculating the adjusted population attributable fraction (aPAF) after multivariate logistic regression analysis adjusted for sex, age, time period, other pathogens, and site. Results: Overall, 888 cases and 870 controls were analyzed; ≥1 microorganism was detected in respiratory samples in 93.0% of cases and 74.4% of controls (P < .001). Streptococcus pneumoniae, Mycoplasma pneumoniae, human metapneumovirus, rhinovirus, respiratory syncytial virus (RSV), parainfluenza virus 1, 3, and 4, and influenza virus A and B were independently associated with pneumonia; aPAF was 42.2% (95% confidence interval [CI], 35.5%-48.2%) for S. pneumoniae, 18.2% (95% CI, 17.4%-19.0%) for RSV, and 11.2% (95% CI, 7.5%-14.7%) for rhinovirus. Conclusions: Streptococcus pneumoniae, RSV, and rhinovirus may be the major microorganisms associated with pneumonia infections in children <5 years of age from developing and emerging countries. Increasing S. pneumoniae vaccination coverage may substantially reduce the burden of pneumonia among children in developing countries.

Indexed as

AsiaCase-Control StudiesChild, PreschoolDeveloping CountriesFemaleHaitiHumansInfantMaleMaliPneumonia, BacterialProspective Studiescase-control studieschilddeveloping countriesetiologypneumonia

Identifiers

PMID28605562
PMCPMC7108107
OpenAlexW2625496552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.