Evidence map›Paper›PMID 28604805›Full record

ArticlePloS one2017

Time-calibrated molecular phylogeny of pteropods.

Alice K Burridge, Christine Hörnlein, Arie W Janssen, Martin Hughes, Stephanie L Bush, Ferdinand Marlétaz, Rebeca Gasca, Annelies C Pierrot-Bults, Ellinor Michel, Jonathan A Todd and 4 more

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Oceanic dispersal barriers in a holoplanktonic gastropod.Journal of evolutionary biology · 2021
    Article
  2. The origin and diversification of pteropods precede past perturbations in the Earth's carbon cycle.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Alice K BurridgeNaturalis Biodiversity Center, Leiden, The Netherlands.
Christine HörnleinInstitute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands.
Arie W JanssenNaturalis Biodiversity Center, Leiden, The Netherlands.
Martin HughesInstitute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands.
Stephanie L BushSmithsonian Institution National Museum of Natural History, Washington DC, United States of America.
Ferdinand MarlétazMolecular Genetics Unit, Okinawa Institute of Science and Technology, Onna-son, Japan.
Rebeca GascaEl Colegio de la Frontera Sur (ECOSUR), Unidad Chetumal, Quintana Roo, Chetumal, Mexico.
Annelies C Pierrot-BultsNaturalis Biodiversity Center, Leiden, The Netherlands.
Ellinor MichelNatural History Museum (NHM), Cromwell Road, London, United Kingdom.
Jonathan A ToddNatural History Museum (NHM), Cromwell Road, London, United Kingdom.
Jeremy R YoungDepartment of Earth Sciences, University College London, London, United Kingdom.
Karen J OsbornSmithsonian Institution National Museum of Natural History, Washington DC, United States of America.
Steph B J MenkenInstitute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands.
Katja T C A PeijnenburgNaturalis Biodiversity Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0001-7544-1079

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pteropods are a widespread group of holoplanktonic gastropod molluscs and are uniquely suitable for study of long-term evolutionary processes in the open ocean because they are the only living metazoan plankton with a good fossil record. Pteropods have been proposed as bioindicators to monitor the impacts of ocean acidification and in consequence have attracted considerable research interest, however, a robust evolutionary framework for the group is still lacking. Here we reconstruct their phylogenetic relationships and examine the evolutionary history of pteropods based on combined analyses of Cytochrome Oxidase I, 28S, and 18S ribosomal rRNA sequences and a molecular clock calibrated using fossils and the estimated timing of the formation of the Isthmus of Panama. Euthecosomes with uncoiled shells were monophyletic with Creseis as the earliest diverging lineage, estimated at 41-38 million years ago (mya). The coiled euthecosomes (Limacina, Heliconoides, Thielea) were not monophyletic contrary to the accepted morphology-based taxonomy; however, due to their high rate heterogeneity no firm conclusions can be drawn. We found strong support for monophyly of most euthecosome genera, but Clio appeared as a polyphyletic group, and Diacavolinia grouped within Cavolinia, making the latter genus paraphyletic. The highest evolutionary rates were observed in Heliconoides inflatus and Limacina bulimoides for both 28S and 18S partitions. Using a fossil-calibrated phylogeny that sets the first occurrence of coiled euthecosomes at 79-66 mya, we estimate that uncoiled euthecosomes evolved 51-42 mya and that most extant uncoiled genera originated 40-15 mya. These findings are congruent with a molecular clock analysis using the Isthmus of Panama formation as an independent calibration. Although not all phylogenetic relationships could be resolved based on three molecular markers, this study provides a useful resource to study pteropod diversity and provides general insight into the processes that generate and maintain their diversity in the open ocean.

Indexed as

Evolution, MolecularPhylogenyAnimalsComputational BiologyDNA Barcoding, TaxonomicFossilsGastropodaGenes, MitochondrialGeographyPanamaSequence Analysis, DNA

Identifiers

PMID28604805
PMCPMC5467808

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.