Evidence map›Paper›PMID 28599600›Full record

ArticleJournal of neurotrauma2018

Transcriptional Changes in the Mouse Retina after Ocular Blast Injury: A Role for the Immune System.

Felix L Struebing, Rebecca King, Ying Li, Micah A Chrenek, Polina N Lyuboslavsky, Curran S Sidhu, P Michael Iuvone, Eldon E Geisert

Abstract read
In one paragraph

Article in Journal of neurotrauma, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Felix L StruebingDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Rebecca KingDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Ying LiDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Micah A ChrenekDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Polina N LyuboslavskyDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Curran S SidhuDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
P Michael IuvoneDepartment of Ophthalmology, Emory University , Atlanta, Georgia .
Eldon E GeisertDepartment of Ophthalmology, Emory University , Atlanta, Georgia .

Funding

P30-Core Grant for Vision Research Core CP30EY006360 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H · 1986 to 2025
$15.3M
VIsion Science Training in AtlantaT32EY007092 · NEI · EMORY UNIVERSITY · PI Machelle T. Pardue · 1985 to 2026
$4.6M
Ocular Growth, Emmetropia, and Interphotoreceptor Retinoid-Binding Protein (IRBP)R01EY021592 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H, IUVONE, P MICHAEL · 2013 to 2021
$3.3M
Modulators of Retinal InjuryR01EY017841 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI GEISERT, ELDON E · 2007 to 2016
$3.0M
NEI NIH HHS P30 EY006360NEI NIH HHS R01 EY017841NEI NIH HHS R01 EY021592NEI NIH HHS T32 EY007092
6 · The paper itself

Abstract

Ocular blast injury is a major medical concern for soldiers and explosion victims due to poor visual outcomes. To define the changes in gene expression following a blast injury to the eye, we examined retinal ribonucleic acid (RNA) expression in 54 mouse strains 5 days after a single 50-psi overpressure air wave blast injury. We observe that almost 40% of genes are differentially expressed with a false discovery rate (FDR) of <0.001, even though the nominal changes in RNA expression are rather small. Moreover, we find through machine learning approaches that genetic networks related to the innate and acquired immune system are activated. Accompanied by lymphocyte invasion into the inner retina, blast injury also results in progressive loss of visual function and retinal ganglion cells (RGCs). Collectively, these data demonstrate how systems genetics can be used to put meaning to the transcriptome changes following ocular blast injury that eventually lead to blindness.

Indexed as

Transcription, GeneticAnimalsBlast InjuriesEye InjuriesGene ExpressionGene Regulatory NetworksMiceRetinaaxon injuryocular blast injuryocular immune systemsystems geneticstranscriptome

Identifiers

PMID28599600
PMCPMC5757081

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.