Evidence map›Paper›PMID 28596482›Full record

ArticleOncotarget2017

Aging-dependent DNA hypermethylation and gene expression of GSTM1 involved in T cell differentiation.

Shu-Hui Yeh, Cheng-Ling Liu, Ren-Chieh Chang, Chih-Chiang Wu, Chia-Hsueh Lin, Kuender D Yang

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Epigenetic Clock: DNA Methylation in Aging.Stem cells international · 2020
    Review
  6. Immune senescence, epigenetics and autoimmunity.Clinical immunology (Orlando, Fla.) · 2018
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Shu-Hui YehGraduate Institute of Long-Term Care, MacKay Medical College, New Taipei City, Taiwan.
Cheng-Ling LiuDepartment of Medical Research and Development, Show Chwan Memorial Hospital at Chang Bing, Changhua, Taiwan.
Ren-Chieh ChangDepartment of Medical Research, Kaohsiung Chang Gung Memorial Hospital, Kaohsiung, Taiwan.
Chih-Chiang WuInstitute of Clinical Medicine, National Yang Ming University, Taipei, Taiwan.
Chia-Hsueh LinDepartment of Medical Research, Mackay Memorial Hospital, Taipei, Taiwan.
Kuender D YangGraduate Institute of Long-Term Care, MacKay Medical College, New Taipei City, Taiwan.
National Yang Ming University Hospital · TWChang Bing Show Chwan Memorial Hospital · TWKaohsiung Chang Gung Memorial Hospital · TWMackay Medical College · TWMackay Memorial Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigated whether aging was associated with epigenetic changes of DNA hypermethylation on immune gene expression and lymphocyte differentiation. We screened CG sites of methylation in blood leukocytes from different age populations, picked up genes with age-related increase of CG methylation content more than 15%, and validated immune related genes with CG hypermethylation involved in lymphocyte differentiation in the aged population. We found that 12 genes (EXHX1、 IL-10、 TSP50、 GSTM1、SLC5A5、SPI1、F2R、LMO2、PTPN6、FGFR2、MMP9、MET) were associated with promoter or exon one DNA hypermethylation in the aged group. Two immune related genes, GSTM1 and LMO2, were chosen to validate its aging-related CG hypermethylation in different leukocytes. We are the first to validate that GSTM1_P266 and LMO2_E128 CG methylation contents in T lymphocytes but not polymorphonuclear cells (PMNs) or mononuclear cells (MNCs) were significantly increased in the aged population. The GSTM1 mRNA expression in T lymphocytes but not PMNs or MNCs was inversely associated with the GSTM1 CG hypermethylation levels in the aged population studied. Further studies showed that lower GSTM1 CG methylation content led to the higher GSTM1 mRNA expression in T cells and knockdown of GSTM1 mRNA expression decreased type 1 T helper cell (Th1) differentiation in Jurkat T cells and normal adult CD4 T cells. The GSTM1_P266 hypermethylation in the aged population associated with lower GSTM1 mRNA expression was involved in Th1 differentiation, highlighting that modulation of aging-associated GSTM1 methylation may be able to enhance T helper cell immunity in the elders.

Indexed as

DNA MethylationAdaptor Proteins, Signal TransducingAgingCell DifferentiationCpG IslandsEpigenesis, GeneticGene Expression ProfilingGene Expression RegulationGlutathione TransferaseHumansLeukocytesLIM Domain ProteinsProto-Oncogene ProteinsRNA, MessengerT-LymphocytesAdaptor Proteins, Signal TransducingGlutathione TransferaseLIM Domain ProteinsLMO2 protein, humanProto-Oncogene ProteinsRNA, MessengeragingDNA hypermethylationepigeneticGerotargetGSTM1T cell differentiation

Identifiers

PMID28596482
PMCPMC5564710
OpenAlexW2618825266

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.