Evidence map›Paper›PMID 28594863›Full record

ArticlePloS one2017

High viral abundance as a consequence of low viral decay in the Baltic Sea redoxcline.

Nicole Köstner, Lisa Scharnreitner, Klaus Jürgens, Matthias Labrenz, Gerhard J Herndl, Christian Winter

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nicole KöstnerDepartment of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-6199-5756
Lisa ScharnreitnerDepartment of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.
Klaus JürgensDepartment of Biological Oceanography, Leibniz Institute for Baltic Sea Research (IOW), Rostock-Warnemünde, Germany.
Matthias LabrenzDepartment of Biological Oceanography, Leibniz Institute for Baltic Sea Research (IOW), Rostock-Warnemünde, Germany.
Gerhard J HerndlDepartment of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.
Christian WinterDepartment of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.

Funding

Austrian Science Fund FWF P 24413
6 · The paper itself

Abstract

Throughout the Baltic Sea redoxcline, virus production and the frequency of lytically-infected prokaryotic cells were estimated from parallel incubations of undiluted seawater and seawater that contained prokaryotes with substantially reduced numbers of viruses (virus dilution approach), effectively preventing viral reinfection during the incubation period. Undiluted seawater incubations resulted in much higher estimates of virus production (6-35×104 mL-1 h-1) and the frequency of infected cells (5-84%) than the virus dilution approach (virus production: 1-3×104 mL-1 h-1; frequency of infected cells: 1-11%). Viral production and the frequency of infected cells from both approaches, however, cannot be directly compared, as data obtained from undiluted incubations were biased by viral reinfection and other uncontrollable processes during the incubation period. High in situ viral abundance (1-2×107 mL-1) together with low virus production rates based on the virus dilution approach resulted in some of the longest viral turnover times (24-84 d) ever reported for the epipelagial. Throughout a wide range of environmental conditions, viral turnover time and burst size were negatively correlated. Given that viral decay estimated in ultra-filtered water was below the detection limit and the burst size was low (1-17), we conclude that prokaryotic viruses in the Baltic Sea redoxcline are investing most of their resources into stress defense (strong capsids) rather than proliferation (high burst size). In summary, the Baltic Sea redoxcline constitutes an environment where low virus production is found in combination with low viral decay, resulting in high viral abundance.

Indexed as

BacteriaBiodiversityCrenarchaeotaEuryarchaeotaSeawaterTemperatureViruses

Identifiers

PMID28594863
PMCPMC5464540

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.