Evidence map›Paper›PMID 28594846›Full record

ArticlePloS one2017

SbCOMT (Bmr12) is involved in the biosynthesis of tricin-lignin in sorghum.

Aymerick Eudes, Tanmoy Dutta, Kai Deng, Nicolas Jacquet, Anagh Sinha, Veronica T Benites, Edward E K Baidoo, Aurore Richel, Scott E Sattler, Trent R Northen and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 93 citations in OpenAlex.

  1. A NovelPlants (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Engineered reduction of S-adenosylmethionine alters lignin in sorghum.Biotechnology for biofuels and bioproducts · 2024
    Article
  10. Review
  11. Metabolic engineering ofPlant biotechnology (Tokyo, Japan) · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Lignin, the Lignification Process, and Advanced, Lignin-Based Materials.International journal of molecular sciences · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Aymerick EudesJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Tanmoy DuttaJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Kai DengJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Nicolas JacquetJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Anagh SinhaJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Veronica T BenitesJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Edward E K BaidooJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Aurore RichelLaboratory of Biological and Industrial Chemistry, University of Liege, Gembloux Agro-Bio Tech, Gembloux, Belgium.
Scott E SattlerWheat, Sorghum, and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Trent R NorthenJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Seema SinghJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Blake A SimmonsJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.
Dominique LoquéJoint BioEnergy Institute, EmeryStation East, Emeryville, California, United States of America.ORCID http://orcid.org/0000-0002-2060-6611
Lawrence Berkeley National Laboratory · USSandia National Laboratories California · USUniversity of Liège · BEUniversité Claude Bernard Lyon 1 · FRUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lignin in plant biomass represents a target for engineering strategies towards the development of a sustainable bioeconomy. In addition to the conventional lignin monomers, namely p-coumaryl, coniferyl and sinapyl alcohols, tricin has been shown to be part of the native lignin polymer in certain monocot species. Because tricin is considered to initiate the polymerization of lignin chains, elucidating its biosynthesis and mechanism of export to the cell wall constitute novel challenges for the engineering of bioenergy crops. Late steps of tricin biosynthesis require two methylation reactions involving the pathway intermediate selgin. It has recently been demonstrated in rice and maize that caffeate O-methyltransferase (COMT) involved in the synthesis syringyl (S) lignin units derived from sinapyl alcohol also participates in the synthesis of tricin in planta. In this work, we validate in sorghum (Sorghum bicolor L.) that the O-methyltransferase responsible for the production of S lignin units (SbCOMT / Bmr12) is also involved in the synthesis of lignin-linked tricin. In particular, we show that biomass from the sorghum bmr12 mutant contains lower level of tricin incorporated into lignin, and that SbCOMT can methylate the tricin precursors luteolin and selgin. Our genetic and biochemical data point toward a general mechanism whereby COMT is involved in the synthesis of both tricin and S lignin units.

Indexed as

Biosynthetic PathwaysBiomassCelluloseChromonesFlavonoidsLigninLuteolinMethanolMethylationPlant ProteinsSorghumCelluloseChromonesFlavonoidsLigninLuteolinMethanolPlant Proteinstricetintricin

Identifiers

PMID28594846
PMCPMC5464547
OpenAlexW2624003845

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.