Evidence map›Paper›PMID 28594404›Full record

ArticleCell death & disease2017

Precision medicine for hepatocelluar carcinoma using molecular pattern diagnostics: results from a preclinical pilot study.

Rahul Agarwal, Yuan Cao, Klaus Hoffmeier, Nicolas Krezdorn, Lukas Jost, Alejandro Rodriguez Meisel, Ruth Jüngling, Francesco Dituri, Serena Mancarella, Björn Rotter and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. TGF-β and the Tissue Microenvironment: Relevance in Fibrosis and Cancer.International journal of molecular sciences · 2018
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Rahul AgarwalGenXPro GmbH, Frankfurt am Main, Germany.
Yuan CaoIRCCS 'S De Bellis', National Institute of Gastroenterology Castellana Grotte, Italy.
Klaus HoffmeierGenXPro GmbH, Frankfurt am Main, Germany.
Nicolas KrezdornGenXPro GmbH, Frankfurt am Main, Germany.
Lukas JostGenXPro GmbH, Frankfurt am Main, Germany.
Alejandro Rodriguez MeiselGenXPro GmbH, Frankfurt am Main, Germany.
Ruth JünglingGenXPro GmbH, Frankfurt am Main, Germany.
Francesco DituriIRCCS 'S De Bellis', National Institute of Gastroenterology Castellana Grotte, Italy.
Serena MancarellaIRCCS 'S De Bellis', National Institute of Gastroenterology Castellana Grotte, Italy.
Björn RotterGenXPro GmbH, Frankfurt am Main, Germany.
Peter WinterGenXPro GmbH, Frankfurt am Main, Germany.
Gianluigi GiannelliIRCCS 'S De Bellis', National Institute of Gastroenterology Castellana Grotte, Italy.
GenXPro (Germany) · DEGastroenterology Hospital "Saverio de Bellis" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to design a road map for personalizing cancer therapy in hepatocellular carcinoma (HCC) by using molecular pattern diagnostics. As an exploratory study, we investigated molecular patterns of tissues of two tumors from individual HCC patients, which in previous experiments had shown contrasting reactions to the phase 2 transforming growth factor beta receptor 1 inhibitor galunisertib. Cancer-driving molecular patterns encompass - inter alias - altered transcription profiles and somatic mutations in coding regions differentiating tumors from their respective peritumoral tissues and from each other. Massive analysis of cDNA ends and all-exome sequencing demonstrate a highly divergent transcriptional and mutational landscape, respectively, for the two tumors, that offers potential explanations for the tumors contrasting responses to galunisertib. Molecular pattern diagnostics (MPDs) suggest alternative, individual-tumor-specific therapies, which in both cases deviate from the standard sorafenib treatment and from each other. Suggested personalized therapies use kinase inhibitors and immune-focused drugs as well as low-toxicity natural compounds identified using an advanced bioinformatics routine included in the MPD protocol. The MPD pipeline we describe here for the prediction of suitable drugs for treatment of two contrasting HCCs may serve as a blueprint for the design of therapies for various types of cancer.

Indexed as

Carcinoma, HepatocellularGene Expression ProfilingGene Expression Regulation, NeoplasticLiver NeoplasmsMolecular Diagnostic TechniquesTranscription, GeneticFemaleHumansMalePilot ProjectsPrecision Medicine

Identifiers

PMID28594404
PMCPMC5520889
OpenAlexW2622246473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.