Evidence map›Paper›PMID 28594392›Full record

ReviewViruses2017

The Human Gut Phage Community and Its Implications for Health and Disease.

Pilar Manrique, Michael Dills, Mark J Young

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed, 1 pooled it
22.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 1 synthesis or guideline pooled it, 264 citations in OpenAlex.

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  20. Human Gut Bacteriophageome: Insights Into Drug Resistance Mechanisms in Tuberculosis.Interdisciplinary perspectives on infectious diseases · 2025
    Review

78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Pilar ManriqueDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA. pilar.manrique.ronquillo@gmail.com.
Michael DillsDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA. michael.dills@msu.montana.edu.
Mark J YoungDepartment of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA. myoung@montana.edu.
Montana State University · US

Funding

Understanding the Healthy Gut Virome and its Role in Human HealthR01GM117361 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI DE VOS, WILLEM M., YOUNG, MARK J · 2016 to 2019
$1.1M
NIGMS NIH HHS R01 GM117361
6 · The paper itself

Abstract

In this review, we assess our current understanding of the role of bacteriophages infecting the human gut bacterial community in health and disease. In general, bacteriophages contribute to the structure of their microbial communities by driving host and viral diversification, bacterial evolution, and by expanding the functional diversity of ecosystems. Gut bacteriophages are an ensemble of unique and shared phages in individuals, which encompass temperate phages found predominately as prophage in gut bacteria (prophage reservoir) and lytic phages. In healthy individuals, only a small fraction of the prophage reservoir is activated and found as extracellular phages. Phage community dysbiosis is characterized by a shift in the activated prophage community or an increase of lytic phages, and has been correlated with disease, suggesting that a proper balance between lysis and lysogeny is needed to maintain health. Consequently, the concept of microbial dysbiosis might be extended to the phage component of the microbiome as well. Understanding the dynamics and mechanisms to restore balance after dysbiosis is an active area of research. The use of phage transplants to re-establish health suggests that phages can be used as disease treatment. Such advances represent milestones in our understanding of gut phages in human health and should fuel research on their role in health and disease.

Indexed as

Gastrointestinal MicrobiomeAnimalsBacteriaBacteriophagesDysbiosisGastrointestinal TractHumansLysogenyMetagenomeMiceProphagesgut microbiome bacteriophagesgut microbiome phagesgut prophage reservoirhealthy gut phages

Identifiers

PMID28594392
PMCPMC5490818
OpenAlexW2623963207

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.