Evidence map›Paper›PMID 28594311›Full record

ArticleRNA biology2017

A lentiviral vector bearing a reverse intron demonstrates superior expression of both proteins and microRNAs.

Brigid Chiyoko Poling, Kevin Tsai, Dong Kang, Linda Ren, Edward M Kennedy, Bryan R Cullen

Abstract read
In one paragraph

Article in RNA biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Brigid Chiyoko Polinga Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.
Kevin Tsaia Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.
Dong Kanga Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.
Linda Rena Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.ORCID 0000-0001-8860-1756
Edward M Kennedya Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.
Bryan R Cullena Department of Molecular Genetics & Microbiology and Center for Virology , Duke University Medical Center , Durham , North Carolina , USA.

Funding

Viral Oncology Training GrantT32CA009111 · NCI · DUKE UNIVERSITY · PI LUFTIG, MICAH A. · 1985 to 2023
$8.9M
Role and mechanism of action of Gamma herpesvirus microRNAsR01AI067968 · NIAID · DUKE UNIVERSITY · PI CULLEN, BRYAN R. · 2006 to 2016
$3.6M
Disruption of latent HIV-1 proviruses using CRISPR/Cas endonucleasesR01AI117780 · NIAID · DUKE UNIVERSITY · PI CULLEN, BRYAN R., GARCIA-MARTINEZ, J. VICTOR · 2015 to 2019
$3.3M
NCI NIH HHS T32 CA009111NIAID NIH HHS R01 AI067968NIAID NIH HHS R01 AI117780
6 · The paper itself

Abstract

While lentiviral expression vectors are widely used in many facets of molecular biology, due to their ability to stably express heterologous genes in both dividing and non-dividing cells, they suffer from the disadvantage that introns inserted into the vector genome are generally rapidly lost by splicing in packaging cell lines. The presence of an intron, if achievable, has the potential to facilitate the expression of transgene cDNAs, as splicing has been extensively shown to facilitate mRNA biogenesis and function. Moreover, if a stable intron could be introduced into a lentiviral vector, this could greatly facilitate the expression of microRNAs (miRNAs), and especially miRNA clusters, as the introduction of pri-miRNA stems into the exonic region of a lentiviral vector can strongly reduce both vector titer and the expression of any miRNA-linked indicator gene due to cleavage of the vector RNA genome by cellular Drosha. Here, we describe a novel lentiviral vector design in which transgenes and/or miRNAs are expressed using an antisense-orientated, inducible promoter driving an expression cassette bearing a functional intron. We demonstrate that this lentiviral vector, called pTREX, is able to express higher levels of both transgenes and pri-miRNA clusters when compared with a closely similar conventional lentiviral vector.

Indexed as

IntronsRNA SplicingCell LineChromosomal Proteins, Non-HistoneeIF-2 KinaseExonsGenetic EngineeringGenetic VectorsGreen Fluorescent ProteinsHEK293 CellsHeLa CellsHumansInsulinLentivirusMicroRNAsOncogene ProteinsChromosomal Proteins, Non-HistoneDEK protein, humanEIF2AK2 protein, humaneIF-2 KinaseGreen Fluorescent ProteinsInsulinMicroRNAsOncogene ProteinsPoly-ADP-Ribose Binding ProteinspreproinsulinProtein PrecursorsRibonuclease IIIThy-1 AntigensIntronlentiviral vectormicroRNAPKRTet-inducibletransgene expression

Identifiers

PMID28594311
PMCPMC5785219

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.