Evidence map›Paper›PMID 28593995›Full record

ArticleNature communications2017

Codon bias imposes a targetable limitation on KRAS-driven therapeutic resistance.

Moiez Ali, Erin Kaltenbrun, Gray R Anderson, Sarah Jo Stephens, Sabrina Arena, Alberto Bardelli, Christopher M Counter, Kris C Wood

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Trial
  2. Clinical utility of longitudinal circulating tumor DNA analysis in metastatic colorectal cancer patients receiving palliative chemotherapy.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Observational
  3. Article
  4. Article
  5. Review
  6. Article
  7. Focus onCancers · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Moiez AliDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Erin KaltenbrunDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Gray R AndersonDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Sarah Jo StephensDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Sabrina ArenaDepartment of Oncology, University of Torino, 10060 Candiolo, Torino, Italy.
Alberto BardelliDepartment of Oncology, University of Torino, 10060 Candiolo, Torino, Italy.
Christopher M CounterDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Kris C WoodDepartment of Pharmacology and Cancer Biology, Duke University, Durham, North California 27710, USA.
Duke University · USUniversity of Turin · IT

Funding

Duke CTSA (Composite)UL1TR001117 · NCATS · DUKE UNIVERSITY · PI BOULWARE, LEIGH E, LI, JENNIFER S · 2013 to 2017
$41.3M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007171 · NIGMS · DUKE UNIVERSITY · PI KONTOS, CHRISTOPHER D · 1985 to 2021
$31.2M
Interdisciplinary Research Careers in Women's HealthK12HD043446 · NICHD · DUKE UNIVERSITY · PI AMUNDSEN, CINDY · 2002 to 2023
$9.6M
Project 4: The role of codon bias in RAS tumorigenesisP01CA203657 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 2016 to 2020
$7.9M
Dynamic requirements of Ras signaling during cancerR01CA123031 · NCI · DUKE UNIVERSITY · PI COUNTER, CHRISTOPHER M · 2007 to 2018
$3.5M
Identification of synthetic lethal interactors in pancreatic cancerU01CA199235 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COX, ADRIENNE D, DER, CHANNING J. · 2015 to 2019
$2.5M
Selectively targeting apoptosis in PIK3CA mutant colorectal cancersR01CA207083 · NCI · DUKE UNIVERSITY · PI WOOD, KRIS C. · 2016 to 2020
$1.8M
The effect of oncogenic Ras signaling strength on cancerR01CA154630 · NCI · DUKE UNIVERSITY · PI COUNTER, CHRISTOPHER M · 2013 to 2016
$796k
The role of KRAS codon bias in tumorigenesisF32CA192715 · NCI · DUKE UNIVERSITY · PI KALTENBRUN, ERIN · 2016 to 2017
$84k
NCATS NIH HHS UL1 TR001117NCI NIH HHS F32 CA192715NCI NIH HHS P01 CA203657NCI NIH HHS R01 CA123031NCI NIH HHS R01 CA154630NCI NIH HHS R01 CA207083NCI NIH HHS U01 CA199235NICHD NIH HHS K12 HD043446NIGMS NIH HHS T32 GM007171
6 · The paper itself

Abstract

KRAS mutations drive resistance to targeted therapies, including EGFR inhibitors in colorectal cancer (CRC). Through genetic screens, we unexpectedly find that mutant HRAS, which is rarely found in CRC, is a stronger driver of resistance than mutant KRAS. This difference is ascribed to common codon bias in HRAS, which leads to much higher protein expression, and implies that the inherent poor expression of KRAS due to rare codons must be surmounted during drug resistance. In agreement, we demonstrate that primary resistance to cetuximab is dependent upon both KRAS mutational status and protein expression level, and acquired resistance is often associated with KRAS

Indexed as

Antibodies, MonoclonalAntineoplastic Agents, ImmunologicalCell Line, TumorCell ProliferationCetuximabCodonColorectal NeoplasmsDrug Resistance, NeoplasmErbB ReceptorsHumansLung NeoplasmsPancreatic NeoplasmsPanitumumabProto-Oncogene Proteins p21(ras)RNA InterferenceRNA, Small InterferingAntibodies, MonoclonalAntineoplastic Agents, ImmunologicalCetuximabCodonEGFR protein, humanErbB ReceptorsHRAS protein, humanKRAS protein, humanPanitumumabProto-Oncogene Proteins p21(ras)RNA, Small Interfering

Identifiers

PMID28593995
PMCPMC5472712
OpenAlexW2621792113

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.