ArticlemSphere
Fine-Scale Structure Analysis Shows Epidemic Patterns of Clonal Complex 95, a Cosmopolitan
Open access · goldAbstract read
In one paragraph
Article in mSphere. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed, 38 citations in OpenAlex.
- Article
- Exploring CRISPR/Cas9-Mediated Gene Editing Advances in Conventional and Non-conventional Yeast Species.Applied biochemistry and biotechnology · 2025Review
- One day in Denmark: whole-genome sequence-based analysis of Escherichia coli isolates from clinical settings.The Journal of antimicrobial chemotherapy · 2025Article
- Diversity, distribution, and population structure of Escherichia coli in the lower gastrointestinal tract of humans.PloS one · 2025Article
- A convergent evolutionary pathway attenuating cellulose production drives enhanced virulence of some bacteria.Nature communications · 2024Article
- Genomics Analysis to Identify Multiple Genetic Determinants That Drive the Global Transmission of the Pandemic ST95 Lineage of Extraintestinal PathogenicPathogens (Basel, Switzerland) · 2022Article
- EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022Article
- Molecular and metabolic characteristics of wastewater associated Escherichia coli strains.Environmental microbiology reports · 2022Article
- Characterization of Escherichia coli harboring colibactin genes (clb) isolated from beef production and processing systems.Scientific reports · 2022Article
- F Plasmid Lineages in Escherichia coli ST95: Implications for Host Range, Antibiotic Resistance, and Zoonoses.mSystems · 2022Article
- Genomic and Phenotypic Analysis of Heat and Sanitizer Resistance in Escherichia coli from Beef in Relation to the Locus of Heat Resistance.Applied and environmental microbiology · 2021Article
- Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period.Genome medicine · 2021Article
- Insights into the acquisition of theMicrobial genomics · 2021Article
- Article
- The population genetics of pathogenic Escherichia coli.Nature reviews. Microbiology · 2021Review
- Horizontally acquired papGII-containing pathogenicity islands underlie the emergence of invasive uropathogenic Escherichia coli lineages.Nature communications · 2020Article
- Phylogenetic background and habitat drive the genetic diversification of Escherichia coli.PLoS genetics · 2020Article
- Clonal Structure, Virulence Factor-encoding Genes and Antibiotic Resistance ofAntibiotics (Basel, Switzerland) · 2020Article
- The EnteroBase user's guide, with case studies onGenome research · 2020Article
- Genotypic analysis of uropathogenic Escherichia coli to understand factors that impact the prevalence of β-lactam-resistant urinary tract infections in a community.Journal of global antimicrobial resistance · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
15 authors at 9 institutions in 4 countries.
David M GordonEcology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia.
Sarah GeyikEcology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia.
Olivier ClermontUMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris, France.
Claire L O'BrienMedical School, Australian National University, Canberra, Australian Capital Territory, Australia.
Shiwei HuangMedical School, Australian National University, Canberra, Australian Capital Territory, Australia.
Charmalie AbayasekaraEcology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia.
Ashwin RajeshEcology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia.
Karina KennedyMedical School, Australian National University, Canberra, Australian Capital Territory, Australia.
Peter CollignonMedical School, Australian National University, Canberra, Australian Capital Territory, Australia.
Paul PavliMedical School, Australian National University, Canberra, Australian Capital Territory, Australia.
Christophe RodriguezUMR 955 INSERM and Université Paris-Est, Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil, France.
Brian D JohnstonVA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota, USA.
James R JohnsonVA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota, USA.
Jean-Winoc DecousserUMR 1137, INSERM, IAME, Paris and Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil, France.
Erick DenamurUMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris, France.
Australian National University · AUCanberra Hospital · AUAssistance Publique – Hôpitaux de Paris · FRACT GovernmentDélégation Paris 7 · FRHôpital Bichat-Claude-Bernard · FRMinneapolis VA Medical Center · USUniversity of Minnesota · USUniversity of Peradeniya · LK
Funding
No grant is acknowledged in the PubMed record.
Abstract
The
Indexed as
clonal complex 95epidemiologyEscherichia colipopulation genetics
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.