Evidence map›Paper›PMID 28591791›Full record

ArticleNucleic acids research2017

5΄-Vinylphosphonate improves tissue accumulation and efficacy of conjugated siRNAs in vivo.

Reka A Haraszti, Loic Roux, Andrew H Coles, Anton A Turanov, Julia F Alterman, Dimas Echeverria, Bruno M D C Godinho, Neil Aronin, Anastasia Khvorova

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
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  3. RNA-Based Therapies for Inherited Metabolic Disorders.Journal of inherited metabolic disease · 2026
    Review
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  11. Optimized chemical structure extends silencing duration of therapeutic siRNAs in dividing cancer and immune cells.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  12. RNA chemistry and therapeutics.Nature reviews. Drug discovery · 2025
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Reka A HarasztiRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Loic RouxRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Andrew H ColesRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Anton A TuranovRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Julia F AltermanRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Dimas EcheverriaRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Bruno M D C GodinhoRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Neil AroninRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
Anastasia KhvorovaRNA Therapeutics Institute, University of Massachusetts Medical School, 01605 Worcester, MA, USA.
University of Massachusetts Chan Medical School · US

Funding

Inter and intra-cellular trafficking pathways for natural and therapeutic RNAsR01GM108803 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KHVOROVA, ANASTASIA · 2014 to 2018
$2.0M
Mid-Scale RNA Synthesis, Purification and Quality Control SystemS10OD020012 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KHVOROVA, ANASTASIA · 2015 to 2015
$563k
NIGMS NIH HHS R01 GM108803NIH HHS S10 OD020012
6 · The paper itself

Abstract

5΄-Vinylphosphonate modification of siRNAs protects them from phosphatases, and improves silencing activity. Here, we show that 5΄-vinylphosphonate confers novel properties to siRNAs. Specifically, 5΄-vinylphosphonate (i) increases siRNA accumulation in tissues, (ii) extends duration of silencing in multiple organs and (iii) protects siRNAs from 5΄-to-3΄ exonucleases. Delivery of conjugated siRNAs requires extensive chemical modifications to achieve stability in vivo. Because chemically modified siRNAs are poor substrates for phosphorylation by kinases, and 5΄-phosphate is required for loading into RNA-induced silencing complex, the synthetic addition of a 5΄-phosphate on a fully modified siRNA guide strand is expected to be beneficial. Here, we show that synthetic phosphorylation of fully modified cholesterol-conjugated siRNAs increases their potency and efficacy in vitro, but when delivered systemically to mice, the 5΄-phosphate is removed within 2 hours. The 5΄-phosphate mimic 5΄-(E)-vinylphosphonate stabilizes the 5΄ end of the guide strand by protecting it from phosphatases and 5΄-to-3΄ exonucleases. The improved stability increases guide strand accumulation and retention in tissues, which significantly enhances the efficacy of cholesterol-conjugated siRNAs and the duration of silencing in vivo. Moreover, we show that 5΄-(E)-vinylphosphonate stabilizes 5΄ phosphate, thereby enabling systemic delivery to and silencing in kidney and heart.

Indexed as

AnimalsExoribonucleasesFemaleGene SilencingHeLa CellsHumansHydrophobic and Hydrophilic InteractionsKidneyLiverMiceModels, MolecularNucleic Acid ConformationOrganophosphonatesPhosphorylationRNA, Guide, CRISPR-Cas SystemsRNA-Induced Silencing ComplexExoribonucleasesOrganophosphonatesRNA, Guide, CRISPR-Cas SystemsRNA-Induced Silencing ComplexRNA, Small InterferingVinyl Compoundsvinylphosphonic acid

Identifiers

PMID28591791
PMCPMC5570069
OpenAlexW2624053477

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.