Evidence map›Paper›PMID 28591167›Full record

ArticlePloS one2017

Genomic analysis of stayability in Nellore cattle.

Daniela Barreto Amaral Teixeira, Gerardo Alves Fernandes Júnior, Danielly Beraldo Dos Santos Silva, Raphael Bermal Costa, Luciana Takada, Daniel Gustavo Mansan Gordo, Tiago Bresolin, Roberto Carvalheiro, Fernando Baldi, Lucia Galvão de Albuquerque

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Genomic Prediction Ability Using Linear and Threshold Approaches for Different Stayability Definitions in Nellore Females.Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Daniela Barreto Amaral TeixeiraFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Gerardo Alves Fernandes JúniorFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.ORCID http://orcid.org/0000-0002-0391-003X
Danielly Beraldo Dos Santos SilvaFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Raphael Bermal CostaEscola de Medicina Veterinária e Zootecnia, UFBA, Salvador, BA, Brazil.
Luciana TakadaFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Daniel Gustavo Mansan GordoFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Tiago BresolinFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Roberto CarvalheiroFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Fernando BaldiFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Lucia Galvão de AlbuquerqueFaculdade de Ciências Agrárias e Veterinárias, UNESP, Jaboticabal, SP, Brazil.
Universidade Estadual Paulista (Unesp) · BRNational Council for Scientific and Technological Development · BRFundação de Estudo e Pesquisa em Medicina Veterinária e Zootecnia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stayability, which can be defined as the probability of a cow calving at a certain age when given the opportunity, is an important reproductive trait in beef cattle because it is directly related to herd profitability. The objective of this study was to estimate genetic parameters and to identify possible genomic regions associated with the phenotypic expression of stayability in Nellore cows. The variance components were estimated by Bayesian inference using a threshold animal model that included the systematic effects of contemporary group and sexual precocity and the random effects of animal and residual. The SNP effects were estimated by the single-step genomic BLUP method using information of 2,838 animals (2,020 females and 930 sires) genotyped with the Illumina High-Density BeadChip Array (San Diego, CA, USA). The variance explained by windows formed by 200 consecutive SNPs was used to identify genomic regions of largest effect on the expression of stayability. The heritability was 0.11 ± 0.01 when A matrix (pedigree) was used and 0.14 ± 0.01 when H matrix (relationship matrix that combines pedigree information and SNP data) was used. A total of 147 candidate genes for stayability were identified on chromosomes 1, 2, 5, 6, 9 and 20 and on the X chromosome. New candidate regions for stayability were detected, most of them related to reproductive, immunological and central nervous system functions.

Indexed as

BreedingGenomeModels, GeneticAnimalsBayes TheoremCattleFemaleGenotypePedigreePhenotypePolymorphism, Single NucleotidePregnancyReproduction

Identifiers

PMID28591167
PMCPMC5462402
OpenAlexW2622635466

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.