Evidence map›Paper›PMID 28588250›Full record

ArticleScientific reports2017

An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1.

Katsumasa Abe, Naoko Mukai, Yuka Morooka, Takeshi Makino, Kenji Oshima, Shouji Takahashi, Yoshio Kera

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. PHP-Family Diesterase fromBiochemistry · 2024
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katsumasa AbeDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.
Naoko MukaiDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.
Yuka MorookaDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.
Takeshi MakinoDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.
Kenji OshimaDepartment of Biological and Chemical Systems Engineering, National Institute of Technology, Kumamoto College, Yatsushiro, Kumamoto, Japan.
Shouji TakahashiDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.
Yoshio KeraDepartment of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan. yoshkera@vos.nagaokaut.ac.jp.
Nagaoka University of Technology · JPNational Institute of Technology, Kumamoto College · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sphingobium sp. strain TCM1 can degrade tris(2-chloroethyl) phosphate (TCEP) to inorganic phosphate and 2-chloroethanol. A phosphotriesterase (PTE), phosphodiesterase (PDE) and phosphomonoesterase (PME) are believed to be involved in the degradation of TCEP. The PTE and PME that respectively catalyze the first and third steps of TCEP degradation in TCM1 have been identified. However, no information has been reported on a PDE catalyzing the second step. In this study, we identified, purified, and characterized a PDE capable of hydrolyzing haloalkyl phosphate diesters. The final preparation of the enzyme had a specific activity of 29 µmol min

Indexed as

Amino Acid SequenceHydrogen-Ion ConcentrationHydrolysisPhosphatesPhosphoric Triester HydrolasesSphingomonadaceaeTemperaturePhosphatesPhosphoric Triester Hydrolases

Identifiers

PMID28588250
PMCPMC5460133
OpenAlexW2618397149

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.