Evidence map›Paper›PMID 28587595›Full record

ArticleBMC genomics2017

Proteomic analysis by iTRAQ-MRM of soybean resistance to Lamprosema Indicate.

Weiying Zeng, Zudong Sun, Zhaoyan Cai, Huaizhu Chen, Zhenguang Lai, Shouzhen Yang, Xiangmin Tang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Weiying ZengGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Zudong SunGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China. sunzudong639@163.com.
Zhaoyan CaiGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Huaizhu ChenGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Zhenguang LaiGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Shouzhen YangGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Xiangmin TangGuangxi Academy of Agricultural Sciences, Nanning, Guangxi, 530007, China.
Guangxi Academy of Agricultural Science · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLamprosema indicate is a major leaf feeding insect pest to soybean, which has caused serious yield losses in central and southern China. To explore the defense mechanisms of soybean resistance to Lamprosema indicate, a highly resistant line (Gantai-2-2) and a highly susceptible line (Wan 82-178) were exposed to Lamprosema indicate larval feedings for 0 h and 48 h, and the differential proteomic analyses of these two lines were carried out.

resultsThe results showed that 31 differentially expressed proteins (DEPs) were identified in the Gantai-2-2 when comparing 48 h feeding with 0 h feeding, and 53 DEPs were identified in the Wan 82-178. 28 DEPs were identified when comparing Gantai-2-2 with Wan 82-178 at 0 h feeding. The bioinformatic analysis results showed that most of the DEPs were associated with ribosome, linoleic acid metabolism, flavonoid biosynthesis, phenylpropanoid biosynthesis, peroxisome, stilbenoid, diarylheptanoid and gingerol biosynthesis, glutathione metabolism, pant hormone signal transduction, and flavone and flavonol biosynthesis, as well as other resistance related metabolic pathways. The MRM analysis showed that the iTRAQ results were reliable.

conclusionsAccording to the analysis of the DEPs results, the soybean defended or resisted the Lamprosema indicate damage by the induction of a synthesis of anti-digestive proteins which inhibit the growth and development of insects, reactive oxygen species scavenging, signaling pathways, secondary metabolites synthesis, and so on.

Indexed as

Mass SpectrometryProteomicsAnimalsCluster AnalysisGene OntologyGlycine maxIsotope LabelingLepidopteraDifferentially expressed proteiniTRAQLamprosema indicate (Fabricius)MRMSoybean

Identifiers

PMID28587595
PMCPMC5461738
OpenAlexW2621448695

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.