Evidence map›Paper›PMID 28585529›Full record

ArticleNature communications2017

Crop wild relative populations of Beta vulgaris allow direct mapping of agronomically important genes.

Gina G Capistrano-Gossmann, D Ries, D Holtgräwe, A Minoche, T Kraft, S L M Frerichmann, T Rosleff Soerensen, J C Dohm, I González, M Schilhabel and 13 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
12.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. Identification of a candidate self-incompatibility locus in beet (Beta vulgaris).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
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  5. Review
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  8. Crop wild relative populations of Beta vulgaris as source for genome-wide association mapping of complex traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  9. Article
  10. Morphological and genetic diversity ofFrontiers in plant science · 2025
    Review
  11. Article
  12. Evaluation ofCurrent issues in molecular biology · 2024
    Article
  13. Data literacy in genome research.Journal of integrative bioinformatics · 2023
    Review
  14. Article
  15. Review
  16. Article
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  19. International journal of molecular sciences · 2022
    Article
  20. Prediction of NB-LRR resistance genes based on full-length sequence homology.The Plant journal : for cell and molecular biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 11 institutions in 8 countries.

Gina G Capistrano-GossmannPlant Breeding Institute, Kiel University, Am Botanischen Garten 1-9, Kiel 24118, Germany.
D RiesCeBiTec &Faculty of Biology, Bielefeld University, Universitätsstraße 25, Bielefeld 33615, Germany.
D HoltgräweCeBiTec &Faculty of Biology, Bielefeld University, Universitätsstraße 25, Bielefeld 33615, Germany.
A MinocheMax Planck Institute for Molecular Genetics, Ihnestraße 73, Berlin 14195, Germany.
T KraftSyngenta Seeds AB, Box 302, Landskrona 26123, Sweden.
S L M FrerichmannPlant Breeding Institute, Kiel University, Am Botanischen Garten 1-9, Kiel 24118, Germany.
T Rosleff SoerensenCeBiTec &Faculty of Biology, Bielefeld University, Universitätsstraße 25, Bielefeld 33615, Germany.
J C DohmDepartment of Biotechnology, University of Natural Resources and Life Sciences (BOKU), Muthgasse 18, 1190 Vienna, Austria.
I GonzálezCentre for Genomic Regulation (CRG), Carrer del Dr. Aiguader 88, Barcelona 08003, Spain.
M SchilhabelPlant Breeding Institute, Kiel University, Am Botanischen Garten 1-9, Kiel 24118, Germany.
M VarrelmannDepartment of Phytopathology, Institute of Sugar Beet Research (IfZ), Holtenser Landstraße 77, Göttingen 37079, Germany.
H TschoepSESVanderHave N.V., Industriepark, Tienen 3300, Belgium.
H UphoffSyngenta Seeds AB, Box 302, Landskrona 26123, Sweden.
K SchützeKWS SAAT SE, Grimsehlstraße 31, Einbeck 37555, Germany.
D BorchardtKWS SAAT SE, Grimsehlstraße 31, Einbeck 37555, Germany.
O ToerjekKWS SAAT SE, Grimsehlstraße 31, Einbeck 37555, Germany.
W MechelkeKWS SAAT SE, Grimsehlstraße 31, Einbeck 37555, Germany.
J C LeinKWS SAAT SE, Grimsehlstraße 31, Einbeck 37555, Germany.
A W SchechertStrube Research GmbH &Co. KG, Hauptstraße 1, Söllingen 38387, Germany.
L FreseFederal Research Centre for Cultivated Plants (JKI), Erwin-Baur-Str. 27, Quedlinburg 06484, Germany.
H HimmelbauerMax Planck Institute for Molecular Genetics, Ihnestraße 73, Berlin 14195, Germany.
B WeisshaarCeBiTec &Faculty of Biology, Bielefeld University, Universitätsstraße 25, Bielefeld 33615, Germany.ORCID 0000-0002-7635-3473
F J Kopisch-ObuchPlant Breeding Institute, Kiel University, Am Botanischen Garten 1-9, Kiel 24118, Germany.
KWS Saat (Germany) · DEBielefeld University · DEHochschule für Angewandte Wissenschaften Kiel · DECentre for Genomic Regulation · ESSyngenta (Switzerland) · CHBOKU University · ATGarvan Institute of Medical Research · AUInstitute of Sugar Beet · CNJulius Kühn-Institut · DEKU Leuven · BELaboratoire de physique des Solides · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid identification of agronomically important genes is of pivotal interest for crop breeding. One source of such genes are crop wild relative (CWR) populations. Here we used a CWR population of <200 wild beets (B. vulgaris ssp. maritima), sampled in their natural habitat, to identify the sugar beet (Beta vulgaris ssp. vulgaris) resistance gene Rz2 with a modified version of mapping-by-sequencing (MBS). For that, we generated a draft genome sequence of the wild beet. Our results show the importance of preserving CWR in situ and demonstrate the great potential of CWR for rapid discovery of causal genes relevant for crop improvement. The candidate gene for Rz2 was identified by MBS and subsequently corroborated via RNA interference (RNAi). Rz2 encodes a CC-NB-LRR protein. Access to the DNA sequence of Rz2 opens the path to improvement of resistance towards rhizomania not only by marker-assisted breeding but also by genome editing.

Indexed as

Contig MappingGene EditingGenes, PlantAllelesBeta vulgarisCrops, AgriculturalDisease ResistanceEcosystemGenetic Association StudiesGenetic VariationGenome, PlantGeographyHybridization, GeneticOpen Reading FramesPhenotypePlant Breeding

Identifiers

PMID28585529
PMCPMC5467160
OpenAlexW2623542750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.