Evidence map›Paper›PMID 28584150›Full record

ArticleAntimicrobial agents and chemotherapy2017

Upregulation of Apoptosis Pathway Genes in Peripheral Blood Mononuclear Cells of HIV-Infected Individuals with Antiretroviral Therapy-Associated Mitochondrial Toxicity.

Yram Foli, Musie Ghebremichael, Min Li, Elijah Paintsil

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yram FoliDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, USA.
Musie GhebremichaelRagon Institute and Harvard Medical School, Cambridge, Massachusetts, USA.
Min LiDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, USA.
Elijah PaintsilDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, USA elijah.paintsil@yale.edu.
Yale University · USRagon Institute of MGH, MIT and Harvard · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
HIV Nucleoside Analogs Translational Studies: Resistance and MetabolismK08AI074404 · NIAID · YALE UNIVERSITY · PI PAINTSIL, ELIJAH · 2008 to 2012
$629k
NCATS NIH HHS UL1 TR001863NIAID NIH HHS K08 AI074404NIAID NIH HHS P30 AI060354
6 · The paper itself

Abstract

A case-control study of the effect of antiretroviral therapy (ART) on apoptosis pathway genes comprising 16 cases (HIV infected with mitochondrial toxicity) and 16 controls (HIV uninfected) was conducted. A total of 26 of 84 genes of the apoptosis pathway were differentially expressed. Two of the upregulated genes, DFFA and TNFRSF1A, classified 75% of study participants correctly as either a case or control. Thus, apoptosis may be in the causal pathway of ART-associated mitochondrial toxicity. These two genes could be markers for detecting and monitoring ART-induced mitochondrial toxicity.

Indexed as

AdultAgedAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveApoptosisApoptosis Regulatory ProteinsCase-Control StudiesCytochromes cDNA, MitochondrialFemaleGene Expression RegulationHIV InfectionsHumansLeukocytes, MononuclearMaleMiddle AgedAnti-HIV AgentsApoptosis Regulatory Proteinscaspase-activated DNase inhibitorCytochromes cDNA, MitochondrialReceptors, Tumor Necrosis Factor, Type Iantiretroviral therapyapoptosisbiomarkermitochondrial toxicity

Identifiers

PMID28584150
PMCPMC5527626
OpenAlexW2624588169

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.