Evidence map›Paper›PMID 28583097›Full record

ArticleBMC pulmonary medicine2017

NRAMP1 and VDR gene polymorphisms in susceptibility to pulmonary tuberculosis among Andhra Pradesh population in India: a case-control study.

Rooth Vasantha Medapati, Sridevi Suvvari, Sudhakar Godi, Paddaiah Gangisetti

Open access · goldAbstract read
In one paragraph

Article in BMC pulmonary medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 2 pooled it
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 2 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Article
  6. Association of Single-Nucleotide Polymorphisms in theInfection and drug resistance · 2023
    Article
  7. Research progress on genetic control of host susceptibility to tuberculosis.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2022
    Review
  8. Review
  9. Tuberculosis and Autoimmunity.Pathophysiology : the official journal of the International Society for Pathophysiology · 2022
    Review
  10. Association ofFrontiers in genetics · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Eat Prey, Live:Frontiers in immunology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rooth Vasantha MedapatiDepartment of Human Genetics, Andhra University, Visakhapatnam, India. ruth_medapati@yahoo.com.
Sridevi SuvvariDepartment of Human Genetics, Andhra University, Visakhapatnam, India.
Sudhakar GodiDepartment of Human Genetics, Andhra University, Visakhapatnam, India.
Paddaiah GangisettiDepartment of Human Genetics, Andhra University, Visakhapatnam, India.
Andhra University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe aim of the present study was to evaluate the association of NRAMP1 -3'UTR, 274-CT,VDR- Fok1 VDR-Taq1 Polymorphisms with the risk of pulmonary tuberculosis.

methodA case -control study was conducted on Andhra Pradesh Population of India. Analysis of gene polymorphisms of NRAMP1 gene (3'UTR, 274CT) and VDR gene (Fok1 and Taq1) was done by using Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) in Tuberculosis (TB) patients and healthy controls. The obtained results were observed using 2% Agarose Gel electrophoresis and analysed statistically using Chi-square test and Odds Ratio.

resultsStatistical significance was observed between the patients and the controls in the NRAMP1-3'UTR (P = 0.005; OR = 2.997; 95% CI = 1.019-8.813) and VDR-Taq1 (P < 0.001; OR = 0.140;95% C.I = 0.050-0.386) polymorphisms in Andhra Pradesh population. No statistical significance was observed between patients and controls of the same population in NRAMP1-274CT and VDR-Fok1 polymorphisms (p > 0.05).

conclusion3'UTR-NRAMP1 gene and VDR-Taq1 gene Polymorphisms are statistically associated with the susceptibility of TB in Andhra Pradesh Population in India.

Indexed as

3' Untranslated RegionsAdolescentAdultAgedCase-Control StudiesCation Transport ProteinsChildGenetic Predisposition to DiseaseHumansIndiaMiddle AgedNatural Resistance-associated Macrophage Protein 1Polymorphism, Restriction Fragment LengthPolymorphism, Single NucleotideReceptors, CalcitriolTuberculosis, Pulmonary3' Untranslated RegionsCation Transport ProteinsNatural Resistance-associated Macrophage Protein 1Receptors, CalcitriolVDR protein, human274CT3′UTRAndhra Pradesh population of IndiaFok1NRAMP1Taq1TuberculosisVDR

Identifiers

PMID28583097
PMCPMC5460471
OpenAlexW2622592839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.