Evidence map›Paper›PMID 28580910›Full record

ArticleActa crystallographica. Section D, Structural biology2017

Electron Bio-Imaging Centre (eBIC): the UK national research facility for biological electron microscopy.

Daniel K Clare, C Alistair Siebert, Corey Hecksel, Christoph Hagen, Valerie Mordhorst, Michael Grange, Alun W Ashton, Martin A Walsh, Kay Grünewald, Helen R Saibil and 2 more

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. A service-based approach to cryoEM facility processing pipelines at eBIC.Acta crystallographica. Section D, Structural biology · 2024
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. The Hard X-ray Nanoprobe beamline at Diamond Light Source.Journal of synchrotron radiation · 2021
    Article
  9. Industrial cryo-EM facility setup and management.Acta crystallographica. Section D, Structural biology · 2020
    Article
  10. Machine learning and big scientific data.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2020
    Article
  11. Article
  12. CM01: a facility for cryo-electron microscopy at the European Synchrotron.Acta crystallographica. Section D, Structural biology · 2019
    Article
  13. Editorial: Technical Advances in Cryo-Electron Microscopy.Frontiers in molecular biosciences · 2019
    Article
  14. Article
  15. Where is crystallography going?Acta crystallographica. Section D, Structural biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Daniel K ClareDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
C Alistair SiebertDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Corey HeckselDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Christoph HagenDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, England.
Valerie MordhorstDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, England.
Michael GrangeDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, England.
Alun W AshtonDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Martin A WalshDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Kay GrünewaldDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Helen R SaibilDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
David I StuartDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.
Peijun ZhangDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
Medical Research Council G1100525Medical Research Council MR/N00065X/1NIGMS NIH HHS P50 GM082251Wellcome Trust 206422/Z/17/Z
6 · The paper itself

Abstract

The recent resolution revolution in cryo-EM has led to a massive increase in demand for both time on high-end cryo-electron microscopes and access to cryo-electron microscopy expertise. In anticipation of this demand, eBIC was set up at Diamond Light Source in collaboration with Birkbeck College London and the University of Oxford, and funded by the Wellcome Trust, the UK Medical Research Council (MRC) and the Biotechnology and Biological Sciences Research Council (BBSRC) to provide access to high-end equipment through peer review. eBIC is currently in its start-up phase and began by offering time on a single FEI Titan Krios microscope equipped with the latest generation of direct electron detectors from two manufacturers. Here, the current status and modes of access for potential users of eBIC are outlined. In the first year of operation, 222 d of microscope time were delivered to external research groups, with 95 visits in total, of which 53 were from unique groups. The data collected have generated multiple high- to intermediate-resolution structures (2.8-8 Å), ten of which have been published. A second Krios microscope is now in operation, with two more due to come online in 2017. In the next phase of growth of eBIC, in addition to more microscope time, new data-collection strategies and sample-preparation techniques will be made available to external user groups. Finally, all raw data are archived, and a metadata catalogue and automated pipelines for data analysis are being developed.

Indexed as

AnimalsCryoelectron MicroscopyElectron Microscope TomographyHumansImaging, Three-DimensionalResearchSpecimen HandlingUnited Kingdomcryo-EMcryo-ETeBICElectron Bio-Imaging Centreuser facilities

Identifiers

PMID28580910
PMCPMC5458490

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.