Evidence map›Paper›PMID 28580734›Full record

ArticleProtein science : a publication of the Protein Society2017

SARS-unique fold in the Rousettus bat coronavirus HKU9.

Robert G Hammond, Xuan Tan, Margaret A Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Biomolecular NMR assignments · 2021
    Article
  3. Review
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Robert G HammondDepartment of Chemistry, University of Alabama at Birmingham, Birmingham, Alabama, 35294.
Xuan TanDepartment of Chemistry, University of Alabama at Birmingham, Birmingham, Alabama, 35294.
Margaret A JohnsonDepartment of Chemistry, University of Alabama at Birmingham, Birmingham, Alabama, 35294.ORCID http://orcid.org/0000-0002-4422-399X
University of Alabama at Birmingham · US

Funding

800 MHz NMR Spectrometer for the Central Alabama High-Field NMR FacilityS10RR022994 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KRISHNA, NEPALLI RAMA · 2009 to 2009
$2.0M
Novel Nucleic Acid-Binding Proteins in Emerging VirusesR35GM119456 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI JOHNSON, MARGARET ALICE · 2016 to 2018
$951k
NCRR NIH HHS S10 RR022994NIGMS NIH HHS R35 GM119456
6 · The paper itself

Abstract

The coronavirus nonstructural protein 3 (nsp3) is a multifunctional protein that comprises multiple structural domains. This protein assists viral polyprotein cleavage, host immune interference, and may play other roles in genome replication or transcription. Here, we report the solution NMR structure of a protein from the "SARS-unique region" of the bat coronavirus HKU9. The protein contains a frataxin fold or double-wing motif, which is an α + β fold that is associated with protein/protein interactions, DNA binding, and metal ion binding. High structural similarity to the human severe acute respiratory syndrome (SARS) coronavirus nsp3 is present. A possible functional site that is conserved among some betacoronaviruses has been identified using bioinformatics and biochemical analyses. This structure provides strong experimental support for the recent proposal advanced by us and others that the "SARS-unique" region is not unique to the human SARS virus, but is conserved among several different phylogenetic groups of coronaviruses and provides essential functions.

Indexed as

AnimalsChiropteraCoronavirusModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein DomainsProtein FoldingRNA-Dependent RNA PolymeraseSevere acute respiratory syndrome-related coronavirusViral Nonstructural ProteinsNsp3 protein, SARS-CoVRNA-Dependent RNA PolymeraseViral Nonstructural Proteinscoronavirusdouble-wing motiffrataxinNMRnonstructural proteinprotein functional annotationSARS-unique domainviral protein

Identifiers

PMID28580734
PMCPMC5563143
OpenAlexW2622303041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.