Evidence map›Paper›PMID 28580643›Full record

ArticleProtein science : a publication of the Protein Society2017

Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.

Kemin Tan, Brooke L Deatherage Kaiser, Ruiying Wu, Marianne Cuff, Yao Fan, Lance Bigelow, Robert P Jedrzejczak, Joshua N Adkins, John R Cort, Gyorgy Babnigg and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Sensor Domain of Histidine Kinase VxrA ofJournal of bacteriology · 2021
    Article
  5. Article
  6. Article
  7. Catch bond drives stator mechanosensitivity in the bacterial flagellar motor.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Kemin TanCenter for Structural Genomics of Infectious Diseases, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois, 60637.
Brooke L Deatherage KaiserNational Security Directorate, Pacific Northwest National Laboratory, Richland, Washington, 99352.
Ruiying WuMidwest Center for Structural Genomics, Argonne National Laboratory, Argonne, Illinois, 60439.
Marianne CuffMidwest Center for Structural Genomics, Argonne National Laboratory, Argonne, Illinois, 60439.
Yao FanMidwest Center for Structural Genomics, Argonne National Laboratory, Argonne, Illinois, 60439.
Lance BigelowMidwest Center for Structural Genomics, Argonne National Laboratory, Argonne, Illinois, 60439.
Robert P JedrzejczakCenter for Structural Genomics of Infectious Diseases, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois, 60637.
Joshua N AdkinsEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, 99352.
John R CortEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, 99352.
Gyorgy BabniggCenter for Structural Genomics of Infectious Diseases, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois, 60637.
Andrzej JoachimiakCenter for Structural Genomics of Infectious Diseases, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois, 60637.
Argonne National Laboratory · USPacific Northwest National Laboratory · USJoint Center for Structural Genomics · USUniversity of Chicago · US

Funding

The Midwest Center for Structural Genomics - Community ResourceR24GM115586 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ · 2015 to 2017
$2.8M
NIGMS NIH HHS R24 GM115586
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium can induce both humoral and cell-mediated responses when establishing itself in the host. These responses are primarily stimulated against the lipopolysaccharide and major outer membrane (OM) proteins. OmpA is one of these major OM proteins. It comprises a N-terminal eight-stranded β-barrel transmembrane domain and a C-terminal domain (OmpA

Indexed as

Bacterial Outer Membrane ProteinsBinding SitesBorrelia burgdorferiModels, MolecularPeptidoglycanProtein ConformationProtein MultimerizationSalmonella typhiSulfatesBacterial Outer Membrane ProteinsOMPA outer membrane proteinsPeptidoglycanSulfatesconformational changedimerizationOmpACTD-like domainOmpA C-terminal domain (OmpACTD)Outer membrane protein A (OmpA)peptidoglycan (PG)PG-binding

Identifiers

PMID28580643
PMCPMC5563150
OpenAlexW2622939986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.