Evidence map›Paper›PMID 28578531›Full record

ArticleVirus genes2017

Discovery and molecular characterization of a novel enamovirus, Grapevine enamovirus-1.

João Marcos Fagundes Silva, Maher Al Rwahnih, Rosana Blawid, Tatsuya Nagata, Thor Vinícius Martins Fajardo

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Identification of a Novel Polerovirus in Cocoa (Pathogens (Basel, Switzerland) · 2023
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Polerovirus genomic variation.Virus evolution · 2021
    Article
  8. Pest categorisation of non-EU viruses and viroids ofEFSA journal. European Food Safety Authority · 2019
    Article
  9. List of non-EU viruses and viroids ofEFSA journal. European Food Safety Authority · 2019
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

João Marcos Fagundes SilvaUniversity of Brasília, Brasília, DF, Brazil.
Maher Al RwahnihDepartment of Plant Pathology, University of California, Davis, CA, USA.
Rosana BlawidUniversity of Brasília, Brasília, DF, Brazil.
Tatsuya NagataUniversity of Brasília, Brasília, DF, Brazil.
Thor Vinícius Martins FajardoEmbrapa Grape & Wine, Bento Gonçalves, RS, Brazil. thor.fajardo@embrapa.br.
Universidade de Brasília · BRBrazilian Agricultural Research Corporation · BRUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we describe a novel putative Enamovirus member, Grapevine enamovirus-1 (GEV-1), discovered by high-throughput sequencing (HTS). A limited survey using HTS of 17 grapevines (Vitis spp.) from the south, southeast, and northeast regions of Brazil led to the detection of GEV-1 exclusively on southern plants, infecting four grapevine cultivars (Cabernet Sauvignon, Semillon, CG 90450, and Cabernet franc) with a remarkable identity of around 99% at the nucleotide level. This novel virus was only detected in multiple-virus infected plants exhibiting viral-like symptoms. GEV-1 was also detected on a cv. Malvasia Longa by RT-PCR. We performed graft-transmissibility assays on GEV-1. The organization, products, and cis-acting regulatory elements of GEV-1 genome are also discussed here. The near complete genome sequence of GEV-1 was obtained during the course of this study, lacking only part of the 3' untranslated terminal region. This is the first report of a virus in the family Luteoviridae infecting grapevines. Based on its genomic properties and phylogenetic analyses, GEV-1 should be classified as a new member of the genus Enamovirus.

Indexed as

Genome, ViralLuteoviridaeOpen Reading FramesPhylogenyPlant DiseasesPlant VirusesViral ProteinsVitisViral ProteinsGEV-1Grapevine enamovirus-1High-throughput sequencingLuteoviridaeVirus discovery

Identifiers

PMID28578531
OpenAlexW2620780283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.