Evidence map›Paper›PMID 28578380›Full record

ArticleScientific reports2017

The zebrafish ventricle: A hub of cardiac endothelial cells for in vitro cell behavior studies.

Chinmoy Patra, Zacharias Kontarakis, Harmandeep Kaur, Amey Rayrikar, Debanjan Mukherjee, Didier Y R Stainier

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Harnessing the regenerative potential ofbioRxiv : the preprint server for biology · 2024
    Article
  6. Review
  7. Article
  8. The regenerative response of cardiac interstitial cells.Journal of molecular cell biology · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Modulation of VEGFA Signaling During Heart Regeneration in Zebrafish.Methods in molecular biology (Clifton, N.J.) · 2022
    Review
  13. Article
  14. Article
  15. The Zebrafish Cardiac Endothelial Cell-Roles in Development and Regeneration.Journal of cardiovascular development and disease · 2021
    Review
  16. Zebrafish as a New Tool in Heart Preservation Research.Journal of cardiovascular development and disease · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Coronary Vasculature in Cardiac Development and Regeneration.Journal of cardiovascular development and disease · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Chinmoy PatraAgharkar Research Institute, Developmental Biology, Pune, India. cpatra@aripune.org.
Zacharias KontarakisMax Planck Institute for Heart and Lung Research, Department of Developmental Genetics, Bad Nauheim, Germany.
Harmandeep KaurMax Planck Institute for Heart and Lung Research, Department of Pharmacology, Bad Nauheim, Germany.
Amey RayrikarAgharkar Research Institute, Developmental Biology, Pune, India.
Debanjan MukherjeeAgharkar Research Institute, Developmental Biology, Pune, India.
Didier Y R StainierMax Planck Institute for Heart and Lung Research, Department of Developmental Genetics, Bad Nauheim, Germany.
Agharkar Research Institute · INMax Planck Institute for Heart and Lung Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite our increasing understanding of zebrafish heart development and regeneration, there is limited information about the distribution of endothelial cells (ECs) in the adult zebrafish heart. Here, we investigate and compare the distribution of cardiac ECs (cECs) in adult mouse and zebrafish ventricles. Surprisingly, we find that (i) active coronary vessel growth is present in adult zebrafish, (ii) ~37 and ~39% of cells in the zebrafish heart are ECs and cardiomyocytes, respectively, a composition similar to that seen in mouse. However, we find that in zebrafish, ~36% of the ventricular tissue is covered with ECs, i.e., a substantially larger proportion than in mouse. Capitalising on the high abundance of cECs in zebrafish, we established a protocol to isolate them with high purity using fluorescent transgenic lines. Our approach eliminates side-effects due to antibody utilisation. Moreover, the isolated cECs maintained a high proliferation index even after three passages and were amenable to pharmacological treatments to study cEC migration in vitro. Such primary cultures will be a useful tool for supplementary in vitro studies on the accumulating zebrafish mutant lines as well as the screening of small molecule libraries on cardiac specific endothelial cells.

Indexed as

ZebrafishAnimalsCell CycleCells, CulturedCoronary VesselsEndothelial CellsFlow CytometryGene Expression ProfilingHeart VentriclesImmunohistochemistryMice, TransgenicMyocytes, CardiacWound Healing

Identifiers

PMID28578380
PMCPMC5457396
OpenAlexW2618097182

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.