Evidence map›Paper›PMID 28576844›Full record

ArticleThe Plant cell2017

The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies.

Guotian Li, Rashmi Jain, Mawsheng Chern, Nikki T Pham, Joel A Martin, Tong Wei, Wendy S Schackwitz, Anna M Lipzen, Phat Q Duong, Kyle C Jones and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 167 citations in OpenAlex.

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  8. Integration of crop modeling and sensing into molecular breeding for nutritional quality and stress tolerance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  9. Review
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  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Guotian LiDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.ORCID http://orcid.org/0000-0001-6780-7085
Rashmi JainDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.ORCID http://orcid.org/0000-0001-6819-847X
Mawsheng ChernDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616 pcronald@ucdavis.edu mschern@ucdavis.edu.ORCID http://orcid.org/0000-0001-8049-719X
Nikki T PhamDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.
Joel A MartinU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.ORCID http://orcid.org/0000-0001-9511-6441
Tong WeiDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.
Wendy S SchackwitzU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.
Anna M LipzenU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.
Phat Q DuongDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.
Kyle C JonesDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.
Liangrong JiangDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.ORCID http://orcid.org/0000-0001-7294-0518
Deling RuanDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616.
Diane BauerU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.
Yi PengU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.
Kerrie W BarryU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.ORCID http://orcid.org/0000-0002-8999-6785
Jeremy SchmutzU.S. Department of Energy Joint Genome Institute, Walnut Creek, California 94598.
Pamela C RonaldDepartment of Plant Pathology and the Genome Center, University of California, Davis, California 95616 pcronald@ucdavis.edu mschern@ucdavis.edu.ORCID http://orcid.org/0000-0002-4107-1345
Lawrence Berkeley National Laboratory · USJoint Genome Institute · USUniversity of California, Davis · USXiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The availability of a whole-genome sequenced mutant population and the cataloging of mutations of each line at a single-nucleotide resolution facilitate functional genomic analysis. To this end, we generated and sequenced a fast-neutron-induced mutant population in the model rice cultivar Kitaake (

Indexed as

DNA, PlantGenome, PlantGenomicsMutationOryzaSequence Analysis, DNADNA, Plant

Identifiers

PMID28576844
PMCPMC5502455
OpenAlexW2951834291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.