Evidence map›Paper›PMID 28576768›Full record

ArticleDevelopment (Cambridge, England)2017

Defining epithelial cell dynamics and lineage relationships in the developing lacrimal gland.

D'Juan T Farmer, Sara Nathan, Jennifer K Finley, Kevin Shengyang Yu, Elaine Emmerson, Lauren E Byrnes, Julie B Sneddon, Michael T McManus, Aaron D Tward, Sarah M Knox

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Advancements in the Application of scRNA-Seq in Breast Research: A Review.International journal of molecular sciences · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Craniofacial developmental biology in the single-cell era.Development (Cambridge, England) · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

D'Juan T FarmerDiabetes Center, University of California, San Francisco, CA, 94143, USA.
Sara NathanDepartment of Cell and Tissue Biology, University of California, San Francisco, CA, 94143, USA.
Jennifer K FinleyDepartment of Cell and Tissue Biology, University of California, San Francisco, CA, 94143, USA.
Kevin Shengyang YuDepartment of Otolaryngology, University of California, San Francisco, CA, 94143, USA.
Elaine EmmersonDepartment of Cell and Tissue Biology, University of California, San Francisco, CA, 94143, USA.
Lauren E ByrnesDiabetes Center, University of California, San Francisco, CA, 94143, USA.
Julie B SneddonDiabetes Center, University of California, San Francisco, CA, 94143, USA.
Michael T McManusDiabetes Center, University of California, San Francisco, CA, 94143, USA.
Aaron D TwardDepartment of Otolaryngology, University of California, San Francisco, CA, 94143, USA.
Sarah M KnoxDepartment of Cell and Tissue Biology, University of California, San Francisco, CA, 94143, USA sarah.knox@ucsf.edu.ORCID 0000-0002-7567-083X

Funding

Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VAISSE, CHRISTIAN · 2003 to 2019
$21.8M
SidTI/2-dependent EC-RNA Biogenesis and UptalceU19CA179513 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MCMANUS, MICHAEL T · 2013 to 2017
$8.3M
PREDOCTORAL TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007470 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 1994 to 2026
$7.7M
Defining mechanisms driving salivary gland regenerationR35DE028255 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KNOX, SARAH MONICA · 2018 to 2025
$7.7M
Defining the role of immune-neuronal crosstalk in dry eye diseaseR01EY026492 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KNOX, SARAH MONICA, MCNAMARA, NANCY A · 2016 to 2018
$1.1M
Defining the role of NPY signaling during lacrimal gland development and regenerationF32EY025139 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FINLEY, JENNIFER K · 2015 to 2016
$67k
Medical Research Council MR/K017047/1NCI NIH HHS U19 CA179513NEI NIH HHS F32 EY025139NEI NIH HHS R01 EY026492NICHD NIH HHS T32 HD007470NIDCR NIH HHS R35 DE028255NIDDK NIH HHS P30 DK063720
6 · The paper itself

Abstract

The tear-producing lacrimal gland is a tubular organ that protects and lubricates the ocular surface. The lacrimal gland possesses many features that make it an excellent model in which to investigate tubulogenesis, but the cell types and lineage relationships that drive lacrimal gland formation are unclear. Using single-cell sequencing and other molecular tools, we reveal novel cell identities and epithelial lineage dynamics that underlie lacrimal gland development. We show that the lacrimal gland from its earliest developmental stages is composed of multiple subpopulations of immune, epithelial and mesenchymal cell lineages. The epithelial lineage exhibits the most substantial cellular changes, transitioning through a series of unique transcriptional states to become terminally differentiated acinar, ductal and myoepithelial cells. Furthermore, lineage tracing in postnatal and adult glands provides the first direct evidence of unipotent KRT5

Indexed as

Cell LineageAcinar CellsAnimalsBiomarkersEpithelial CellsFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalHumansLacrimal ApparatusMicePhenotypeSequence Analysis, RNASingle-Cell AnalysisStem CellsBiomarkersDevelopmentEpitheliaLacrimal glandSingle cell sequencingTubulogenesis

Identifiers

PMID28576768
PMCPMC5536870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.