Evidence map›Paper›PMID 28575374›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2017

Evaluation of Pneumococcal Load in Blood by Polymerase Chain Reaction for the Diagnosis of Pneumococcal Pneumonia in Young Children in the PERCH Study.

Maria Deloria Knoll, Susan C Morpeth, J Anthony G Scott, Nora L Watson, Daniel E Park, Henry C Baggett, W Abdullah Brooks, Daniel R Feikin, Laura L Hammitt, Stephen R C Howie and 28 more

Open access · hybridAbstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. The Etiology of Pneumonia From Analysis of Lung Aspirate and Pleural Fluid Samples: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. AsymptomaticeLife · 2021
    Observational
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Association of C-Reactive Protein With Bacterial and Respiratory Syncytial Virus-Associated Pneumonia Among Children Aged <5 Years in the PERCH Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Article
  14. Detection of Pneumococcal DNA in Blood by Polymerase Chain Reaction for Diagnosing Pneumococcal Pneumonia in Young Children From Low- and Middle-Income Countries.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Article
  15. Introduction to the Epidemiologic Considerations, Analytic Methods, and Foundational Results From the Pneumonia Etiology Research for Child Health Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 18 institutions in 10 countries.

Maria Deloria KnollDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Susan C MorpethKenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi.
J Anthony G ScottKenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi.
Nora L WatsonEmmes Corporation, Rockville, Maryland.
Daniel E ParkDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Henry C BaggettGlobal Disease Detection Center, Thailand Ministry of Public Health-US Centers for Disease Control and Prevention Collaboration, Nonthaburi.
W Abdullah BrooksInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka and Matlab.
Daniel R FeikinDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Laura L HammittDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Stephen R C HowieMedical Research Council Unit, Basse, The Gambia.
Karen L KotloffDivision of Infectious Disease and Tropical Pediatrics, Department of Pediatrics, Center for Vaccine Development, Institute of Global Health, University of Maryland School of Medicine, Baltimore.
Orin S LevineDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Katherine L O'BrienDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Donald M TheaCenter for Global Health and Development, Boston University School of Public Health, Massachusetts.
Dilruba AhmedInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka and Matlab.
Martin AntonioMedical Research Council Unit, Basse, The Gambia.
Juliet O AworiKenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi.
Vicky L BaillieMedical Research Council, Respiratory and Meningeal Pathogens Research Unit and.
James ChipetaDepartment of Paediatrics and Child Health, University of Zambia School of Medicine, and University Teaching Hospital, Lusaka.
Andrea N DelucaDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Michel DioneMedical Research Council Unit, Basse, The Gambia.
Amanda J DriscollDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Melissa M HigdonDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Anchalee JatapaiGlobal Disease Detection Center, Thailand Ministry of Public Health-US Centers for Disease Control and Prevention Collaboration, Nonthaburi.
Ruth A KarronDepartment of International Health, Center for Immunization Research, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Razib MazumderInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka and Matlab.
David P MooreMedical Research Council, Respiratory and Meningeal Pathogens Research Unit and.
James MwansaDepartment of Pathology and Microbiology, University Teaching Hospital and.
Sammy NyongesaKenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi.
Christine ProsperiDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Phil SeidenbergCenter for Global Health and Development, Boston University School of Public Health, Massachusetts.
Duangkamon SiludjaiGlobal Disease Detection Center, Thailand Ministry of Public Health-US Centers for Disease Control and Prevention Collaboration, Nonthaburi.
Samba O SowCentre pour le Développement des Vaccins (CVD-Mali), Bamako.
Boubou TambouraCentre pour le Développement des Vaccins (CVD-Mali), Bamako.
Scott L ZegerDepartment of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
David R MurdochDepartment of Pathology, University of Otago, and.
Shabir A MadhiMedical Research Council, Respiratory and Meningeal Pathogens Research Unit and.
PERCH Study Group
Johns Hopkins University · USUniversity of the Witwatersrand · ZABoston University · USCenters for Disease Control and Prevention · USCentre Pour le Développement des Vaccins-Mali · MLKenya Medical Research Institute · KEMiddlemore Hospital · NZUniversity Teaching Hospital · ZMGates Foundation · USMilken Institute · USUniversity of Auckland · NZUniversity of Maryland, Baltimore · USUniversity of Warwick · GBCanterbury Health Laboratories · NZEmmes (United States) · USInternational Centre for Diarrhoeal Disease Research · BDMinistry of Public Health · THMRC Unit the Gambia · GM

Funding

Medical Research Council MC_U190088478
6 · The paper itself

Abstract

BACKGROUND.: Detection of pneumococcus by lytA polymerase chain reaction (PCR) in blood had poor diagnostic accuracy for diagnosing pneumococcal pneumonia in children in 9 African and Asian sites. We assessed the value of blood lytA quantification in diagnosing pneumococcal pneumonia. METHODS.: The Pneumonia Etiology Research for Child Health (PERCH) case-control study tested whole blood by PCR for pneumococcus in children aged 1-59 months hospitalized with signs of pneumonia and in age-frequency matched community controls. The distribution of load among PCR-positive participants was compared between microbiologically confirmed pneumococcal pneumonia (MCPP) cases, cases confirmed for nonpneumococcal pathogens, nonconfirmed cases, and controls. Receiver operating characteristic analyses determined the "optimal threshold" that distinguished MCPP cases from controls. RESULTS.: Load was available for 290 of 291 cases with pneumococcal PCR detected in blood and 273 of 273 controls. Load was higher in MCPP cases than controls (median, 4.0 × 103 vs 0.19 × 103 copies/mL), but overlapped substantially (range, 0.16-989.9 × 103 copies/mL and 0.01-551.9 × 103 copies/mL, respectively). The proportion with high load (≥2.2 log10 copies/mL) was 62.5% among MCPP cases, 4.3% among nonconfirmed cases, 9.3% among cases confirmed for a nonpneumococcal pathogen, and 3.1% among controls. Pneumococcal load in blood was not associated with respiratory tract illness in controls (P = .32). High blood pneumococcal load was associated with alveolar consolidation on chest radiograph in nonconfirmed cases, and with high (>6.9 log10 copies/mL) nasopharyngeal/oropharyngeal load and C-reactive protein ≥40 mg/L (both P < .01) in nonconfirmed cases but not controls. CONCLUSIONS.: Quantitative pneumococcal PCR in blood has limited diagnostic utility for identifying pneumococcal pneumonia in individual children, but may be informative in epidemiological studies.

Indexed as

Bacterial LoadCase-Control StudiesChild, PreschoolDNA, BacterialFemaleGenes, BacterialHumansInfantInfant, NewbornInternationalityMaleNasopharynxPneumonia, PneumococcalReal-Time Polymerase Chain ReactionStreptococcus pneumoniaeDNA, Bacterialblooddiagnosis.PCRpneumococcuspneumonia

Identifiers

PMID28575374
PMCPMC5447847
OpenAlexW2616901981

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.