Evidence map›Paper›PMID 28572719›Full record

ArticleThe Journal of imaging science and technology

Multi-GPU Acceleration of Branchless Distance Driven Projection and Backprojection for Clinical Helical CT.

Ayan Mitra, David G Politte, Bruce R Whiting, Jeffrey F Williamson, Joseph A O'Sullivan

Abstract read
In one paragraph

Article in The Journal of imaging science and technology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ayan MitraDepartment of Electrical and Systems Engineering, Washington University, 1 Brookings Drive, Saint Louis, MO, 63130.
David G PolitteMallinckrodt Institute of Radiology, Washington University School of Medicine, 510 South Kingshighway Blvd, Saint Louis, MO, 63110.
Bruce R WhitingDepartment of Radiology, University of Pittsburgh, Pittsburgh, PA 15213.
Jeffrey F WilliamsonDepartment of Radiation Oncology, Virginia Commonwealth University, Richmond, VA 23298.
Joseph A O'SullivanDepartment of Electrical and Systems Engineering, Washington University, 1 Brookings Drive, Saint Louis, MO, 63130.

Funding

QUANTITATIVE DUAL-ENERGY CT IMAGING FOR CANCER IMAGING AND RADIATION THERAPY APPLICATIONSR01CA212638 · NCI · WASHINGTON UNIVERSITY · PI O'SULLIVAN, JOSEPH A · 2017 to 2021
$2.3M
Measuring the Impact of Noise on CT ReadersR01EB019135 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WHITING, BRUCE R · 2015 to 2018
$1.9M
Quantitative dual-energy CT imaging for radiation therapy treatment planningR01CA149305 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI WEISS, ELISABETH · 2011 to 2015
$1.6M
NCI NIH HHS R01 CA149305NCI NIH HHS R01 CA212638NIBIB NIH HHS R01 EB019135
6 · The paper itself

Abstract

Model-based image reconstruction (MBIR) techniques have the potential to generate high quality images from noisy measurements and a small number of projections which can reduce the x-ray dose in patients. These MBIR techniques rely on projection and backprojection to refine an image estimate. One of the widely used projectors for these modern MBIR based technique is called branchless distance driven (DD) projection and backprojection. While this method produces superior quality images, the computational cost of iterative updates keeps it from being ubiquitous in clinical applications. In this paper, we provide several new parallelization ideas for concurrent execution of the DD projectors in multi-GPU systems using CUDA programming tools. We have introduced some novel schemes for dividing the projection data and image voxels over multiple GPUs to avoid runtime overhead and inter-device synchronization issues. We have also reduced the complexity of overlap calculation of the algorithm by eliminating the common projection plane and directly projecting the detector boundaries onto image voxel boundaries. To reduce the time required for calculating the overlap between the detector edges and image voxel boundaries, we have proposed a pre-accumulation technique to accumulate image intensities in perpendicular 2D image slabs (from a 3D image) before projection and after backprojection to ensure our DD kernels run faster in parallel GPU threads. For the implementation of our iterative MBIR technique we use a parallel multi-GPU version of the alternating minimization (AM) algorithm with penalized likelihood update. The time performance using our proposed reconstruction method with Siemens Sensation 16 patient scan data shows an average of 24 times speedup using a single TITAN X GPU and 74 times speedup using 3 TITAN X GPUs in parallel for combined projection and backprojection.

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.