Evidence map›Paper›PMID 28571309›Full record

ArticleACS synthetic biology2017

Multiplex Genome Editing by Natural Transformation (MuGENT) for Synthetic Biology in Vibrio natriegens.

Triana N Dalia, Chelsea A Hayes, Sergey Stolyar, Christopher J Marx, James B McKinlay, Ankur B Dalia

Abstract read
In one paragraph

Article in ACS synthetic biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed.

  1. Review
  2. Formate-driven efficient pyruvate biosynthesis inSynthetic and systems biotechnology · 2026
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  6. Nitrogenase regulation inbioRxiv : the preprint server for biology · 2026
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  10. Applied and environmental microbiology · 2026
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  18. Deployment of amBio · 2025
    Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Triana N DaliaDepartment of Biology, Indiana University , Bloomington, Indiana 47401, United States.
Chelsea A HayesDepartment of Biology, Indiana University , Bloomington, Indiana 47401, United States.
Sergey StolyarDepartment of Biological Sciences, University of Idaho , Moscow, Idaho 83844, United States.
Christopher J MarxDepartment of Biological Sciences, University of Idaho , Moscow, Idaho 83844, United States.
James B McKinlayDepartment of Biology, Indiana University , Bloomington, Indiana 47401, United States.
Ankur B DaliaDepartment of Biology, Indiana University , Bloomington, Indiana 47401, United States.ORCID 0000-0003-2203-1230

Funding

Vibrio cholerae-chitin interactions and their role in cholera transmission and evolutionK22AI118863 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI DALIA, ANKUR · 2016 to 2017
$268k
NIAID NIH HHS K22 AI118863
6 · The paper itself

Abstract

Vibrio natriegens has recently emerged as an alternative to Escherichia coli for molecular biology and biotechnology, but low-efficiency genetic tools hamper its development. Here, we uncover how to induce natural competence in V. natriegens and describe methods for multiplex genome editing by natural transformation (MuGENT). MuGENT promotes integration of multiple genome edits at high-efficiency on unprecedented time scales. Also, this method allows for generating highly complex mutant populations, which can be exploited for metabolic engineering efforts. As a proof-of-concept, we attempted to enhance production of the value added chemical poly-β-hydroxybutyrate (PHB) in V. natriegens by targeting the expression of nine genes involved in PHB biosynthesis via MuGENT. Within 1 week, we isolated edited strains that produced ∼100 times more PHB than the parent isolate and ∼3.3 times more than a rationally designed strain. Thus, the methods described here should extend the utility of this species for diverse academic and industrial applications.

Indexed as

Bacterial ProteinsGene EditingGene Expression Regulation, BacterialGenes, BacterialMetabolic EngineeringRecombinant ProteinsSynthetic BiologyTransformation, BacterialVibrioBacterial ProteinsRecombinant Proteins

Identifiers

PMID28571309
PMCPMC6519440

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.