Evidence map›Paper›PMID 28570707›Full record

ArticlePloS one2017

De novo characterization of the pine aphid Cinara pinitabulaeformis Zhang et Zhang transcriptome and analysis of genes relevant to pesticides.

Songqing Wu, Zhicheng Huang, Carballar-Lejarazú Rebeca, Xiaoli Zhu, Yajie Guo, Qiannan Lin, Xia Hu, Rong Wang, Guanghong Liang, Xiong Guan and 1 more

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Effects of the termination of LCFrontiers in physiology · 2023
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Songqing WuCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Zhicheng HuangFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Carballar-Lejarazú RebecaDepartment of Biology and Biotechnology, University of Pavia, Pavia, Italy.
Xiaoli ZhuFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Yajie GuoCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Qiannan LinCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Xia HuCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Rong WangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Guanghong LiangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Xiong GuanFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.
Feiping ZhangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, People's Republic of China.ORCID http://orcid.org/0000-0002-4816-9927

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pine aphid Cinara pinitabulaeformis Zhang et Zhang is the main pine pest in China, it causes pine needles to produce dense dew (honeydew) which can lead to sooty mold (black filamentous saprophytic ascomycetes). Although common chemical and physical strategies are used to prevent the disease caused by C. pinitabulaeformis Zhang et Zhang, new strategies based on biological and/or genetic approaches are promising to control and eradicate the disease. However, there is no information about genomics, proteomics or transcriptomics to allow the design of new control strategies for this pine aphid. We used next generation sequencing technology to sequence the transcriptome of C. pinitabulaeformis Zhang et Zhang and built a transcriptome database. We identified 80,259 unigenes assigned for Gene Ontology (GO) terms and information for a total of 11,609 classified unigenes was obtained in the Clusters of Orthologous Groups (COGs). A total of 10,806 annotated unigenes were analyzed to identify the represented biological pathways, among them 8,845 unigenes matched with 228 KEGG pathways. In addition, our data describe propagative viruses, nutrition-related genes, detoxification related molecules, olfactory related receptors, stressed-related protein, putative insecticide resistance genes and possible insecticide targets. Moreover, this study provides valuable information about putative insecticide resistance related genes and for the design of new genetic/biological based strategies to manage and control C. pinitabulaeformis Zhang et Zhang populations.

Indexed as

Genes, InsectPesticidesTranscriptomeAnimalsAphidsPinusPesticides

Identifiers

PMID28570707
PMCPMC5453536

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.