Evidence map›Paper›PMID 28570677›Full record

ArticlePloS one2017

Detecting early signs of heat and drought stress in Phoenix dactylifera (date palm).

Omid Safronov, Jürgen Kreuzwieser, Georg Haberer, Mohamed S Alyousif, Waltraud Schulze, Naif Al-Harbi, Leila Arab, Peter Ache, Thomas Stempfl, Joerg Kruse and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 72 citations in OpenAlex.

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  20. Crop metabolomics: from diagnostics to assisted breeding.Metabolomics : Official journal of the Metabolomic Society · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 3 countries.

Omid SafronovDepartment of Biosciences, University of Helsinki, Helsinki, Finland.
Jürgen KreuzwieserInstitute of Forest Sciences, University of Freiburg, Freiburg, Germany.
Georg HabererHelmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Plant Genome and Systems Biology, Neuherberg, Germany.
Mohamed S AlyousifCollege of Sciences, King Saud University, Riyadh, Saudi Arabia.
Waltraud SchulzeInstitute for Physiology and Biotechnology of Plants, Plant Systems Biology, University of Hohenheim, Stuttgart, Germany.
Naif Al-HarbiCollege of Sciences, King Saud University, Riyadh, Saudi Arabia.
Leila ArabInstitute of Forest Sciences, University of Freiburg, Freiburg, Germany.
Peter AcheInstitute for Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg, Germany.
Thomas StempflCenter of Excellence for Fluorescent Bioanalytics (KFB), University of Regensburg, Regensburg, Germany.
Joerg KruseInstitute of Forest Sciences, University of Freiburg, Freiburg, Germany.
Klaus X MayerHelmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Plant Genome and Systems Biology, Neuherberg, Germany.
Rainer HedrichInstitute for Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg, Germany.
Heinz RennenbergInstitute of Forest Sciences, University of Freiburg, Freiburg, Germany.
Jarkko SalojärviDepartment of Biosciences, University of Helsinki, Helsinki, Finland.
Jaakko KangasjärviDepartment of Biosciences, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0002-8959-1809
University of Freiburg · DEKing Saud University · SAUniversity of Helsinki · FIUniversity of Würzburg · DEHelmholtz Zentrum München · DEUniversity of Hohenheim · DEUniversity of Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants adapt to the environment by either long-term genome evolution or by acclimatization processes where the cellular processes and metabolism of the plant are adjusted within the existing potential in the genome. Here we studied the adaptation strategies in date palm, Phoenix dactylifera, under mild heat, drought and combined heat and drought by transcriptomic and metabolomic profiling. In transcriptomics data, combined heat and drought resembled heat response, whereas in metabolomics data it was more similar to drought. In both conditions, soluble carbohydrates, such as fucose, and glucose derivatives, were increased, suggesting a switch to carbohydrate metabolism and cell wall biogenesis. This result is consistent with the evidence from transcriptomics and cis-motif analysis. In addition, transcriptomics data showed transcriptional activation of genes related to reactive oxygen species in all three conditions (drought, heat, and combined heat and drought), suggesting increased activity of enzymatic antioxidant systems in cytosol, chloroplast and peroxisome. Finally, the genes that were differentially expressed in heat and combined heat and drought stresses were significantly enriched for circadian and diurnal rhythm motifs, suggesting new stress avoidance strategies.

Indexed as

DroughtsHot TemperatureStress, PhysiologicalAntioxidantsGenes, PlantMetabolomicsPhoeniceaeReactive Oxygen SpeciesAntioxidantsReactive Oxygen Species

Identifiers

PMID28570677
PMCPMC5453443
OpenAlexW2621371958

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.