Evidence map›Paper›PMID 28570534›Full record

ArticleJournal of visualized experiments : JoVE2017

Quantification of Endosome and Lysosome Motilities in Cultured Neurons Using Fluorescent Probes.

Fuminori Tsuruta, Tomomi Okajima, Sarasa Yano, Tomoki Chiba

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Characterisation ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  4. Microglial dynamics during brain development.Neural regeneration research · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Fuminori TsurutaGraduate School of Life and Environmental Sciences, University of Tsukuba; PhD Program in Human Biology, School of Integrative and Global Majors, University of Tsukuba; Life Science Center of Tsukuba Advanced Research Alliance (TARA), University of Tsukuba; tsuruta.fuminori.fn@u.tsukuba.ac.jp.
Tomomi OkajimaGraduate School of Life and Environmental Sciences, University of Tsukuba.
Sarasa YanoGraduate School of Life and Environmental Sciences, University of Tsukuba.
Tomoki ChibaGraduate School of Life and Environmental Sciences, University of Tsukuba; PhD Program in Human Biology, School of Integrative and Global Majors, University of Tsukuba; Life Science Center of Tsukuba Advanced Research Alliance (TARA), University of Tsukuba.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the brain, membrane trafficking systems play important roles in regulating neuronal functions, such as neuronal morphology, synaptic plasticity, survival, and glial communications. To date, numerous studies have reported that defects in these systems cause various neuronal diseases. Thus, understanding the mechanisms underlying vesicle dynamics may provide influential clues that could aid in the treatment of several neuronal disorders. Here, we describe a method for quantifying vesicle motilities, such as motility distance and rate of movement, using a software plug-in for the ImageJ platform. To obtain images for quantification, we labeled neuronal endosome-lysosome structures with EGFP-tagged vesicle marker proteins and observed the movement of vesicles using a time-lapse microscopy. This method is highly useful and simplify measuring vesicle motility in neurites, such as axons and dendrites, as well as in the soma of both neurons and glial cells. Furthermore, this method can be applied to other cell lines, such as fibroblasts and endothelial cells. This approach could provide a valuable advancement of our understanding of membrane trafficking.

Indexed as

EndosomesLysosomesAnimalsFluorescent DyesGreen Fluorescent ProteinsMice, Inbred C57BLMice, Inbred ICRNeuronsSoftwareenhanced green fluorescent proteinFluorescent DyesGreen Fluorescent Proteins

Identifiers

PMID28570534
PMCPMC5608013

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.