Evidence map›Paper›PMID 28569247›Full record

ArticleJournal of biosciences2017

Cytoplasmic tail of coronavirus spike protein has intracellular targeting signals.

Jibin Sadasivan, Manmeet Singh, Jayasri DAS Sarma

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biosciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Virus-Induced Cell Fusion and Syncytia Formation.Results and problems in cell differentiation · 2024
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  6. Review
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  11. The N1038S Substitution andFrontiers in microbiology · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Sentinel cells enable genetic detection of SARS-CoV-2 Spike protein.bioRxiv : the preprint server for biology · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Frontiers in cellular neuroscience · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jibin SadasivanDepartment of Biological Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur 741 246, India.
Manmeet Singh
Jayasri DAS Sarma
Indian Institute of Science Education and Research Kolkata · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intracellular trafficking and localization studies of spike protein from SARS and OC43 showed that SARS spike protein is localized in the ER or ERGIC compartment and OC43 spike protein is predominantly localized in the lysosome. Differential localization can be explained by signal sequence. The sequence alignment using Clustal W shows that the signal sequence present at the cytoplasmic tail plays an important role in spike protein localization. A unique GYQEL motif is identified at the cytoplasmic terminal of OC43 spike protein which helps in localization in the lysosome, and a novel KLHYT motif is identified in the cytoplasmic tail of SARS spike protein which helps in ER or ERGIC localization. This study sheds some light on the role of cytoplasmic tail of spike protein in cell-to-cell fusion, coronavirus host cell fusion and subsequent pathogenicity.

Indexed as

Protein Sorting SignalsAmino Acid MotifsAmino Acid SequenceCoronavirusCytoplasmGene Expression Regulation, ViralHeLa CellsHumansMembrane GlycoproteinsMutationProtein ConformationProtein TransportSpike Glycoprotein, CoronavirusMembrane GlycoproteinsProtein Sorting SignalsSpike Glycoprotein, Coronavirus

Identifiers

PMID28569247
PMCPMC7091306
OpenAlexW2605930072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.