Evidence map›Paper›PMID 28566479›Full record

ArticleJournal of the American Society of Nephrology : JASN2017

Targeted Exome Sequencing Identifies

Laurence Heidet, Vincent Morinière, Charline Henry, Lara De Tomasi, Madeline Louise Reilly, Camille Humbert, Olivier Alibeu, Cécile Fourrage, Christine Bole-Feysot, Patrick Nitschké and 15 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Article
  3. Functional Validation of a Novel <italic>PBX1</italic> Missense Variant in a 46,XY Girl.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Comprehensive summary: the role of PBX1 in development and cancers.Frontiers in cell and developmental biology · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Overexpression of long noncoding RNAFrontiers in cell and developmental biology · 2023
    Article
  17. Article
  18. Genetic spectrum of CAKUT and risk factors for kidney failure: a pediatric multicenter cohort study.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2022
    Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 13 institutions in 2 countries.

Laurence HeidetAssistance Publique - Hôpitaux de Paris, Centre de référence des Maladies Rénales Héréditaires de l'Enfant et de l'Adulte, Paris, France.
Vincent MorinièreAssistance Publique - Hôpitaux de Paris, Centre de référence des Maladies Rénales Héréditaires de l'Enfant et de l'Adulte, Paris, France.
Charline HenryInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases.
Lara De TomasiInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases.
Madeline Louise ReillyInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases.
Camille HumbertInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases.
Olivier AlibeuGenomic Platform, Institut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Paris Descartes Sorbonne Paris Cité University, and.
Cécile FourrageAssistance Publique - Hôpitaux de Paris, Département de Génétique, and.
Christine Bole-FeysotGenomic Platform, Institut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Paris Descartes Sorbonne Paris Cité University, and.
Patrick NitschkéBioinformatic Plateform, Paris Descartes Sorbonne Paris Cité University, Imagine Institute, Paris, France.
Frédéric ToresBioinformatic Plateform, Paris Descartes Sorbonne Paris Cité University, Imagine Institute, Paris, France.
Marc BrasBioinformatic Plateform, Paris Descartes Sorbonne Paris Cité University, Imagine Institute, Paris, France.
Marc JeanpierreParis Descartes Sorbonne Paris Cité University, Paris, France.
Christine PietrementUnité de néphrologie pédiatrique and.
Dominique GaillardService de Génétique clinique, Centre Hospitalo-Universitaire de Reims, Reims, France.
Marie GonzalesAssistance Publique - Hôpitaux de Paris, Département de Génétique Médicale, Hôpital Armand Trousseau and Université Pierre et Marie Curie, Paris, France.
Robert NovoCentre Hospitalo-Universitaire de Lille, Hôpital Jeanne de Flandre, Service de Néphrologie Pédiatrique, Lille, France.
Elise SchaeferService de Génétique Médicale, Institut de Génétique Médicale d'Alsace, Hôpitaux Universitaires de Strasbourg, Strasbourg, France.
Joëlle RoumeUnité de Génétique Médicale, Centre Hospitalier Intercommunal Poissy, St. Germain en Laye, Poissy, France; and.
Jelena MartinovicAssistance Publique - Hôpitaux de Paris, Unit of Fetal Pathology, Antoine Béclère Hospital, Clamart, France.
Valérie MalanAssistance Publique - Hôpitaux de Paris, Service de Cytogénétique, Hôpital Universitaire Necker-Enfants malades, Paris, France.
Rémi SalomonAssistance Publique - Hôpitaux de Paris, Centre de référence des Maladies Rénales Héréditaires de l'Enfant et de l'Adulte, Paris, France.
Sophie SaunierInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases.
Corinne AntignacAssistance Publique - Hôpitaux de Paris, Département de Génétique, and.
Cécile JeanpierreInstitut National de la Santé et de la Recherche Médicale Unité Mixte de Recherche 1163, Laboratory of Hereditary Kidney Diseases, cecile.jeanpierre@inserm.fr.
Assistance Publique – Hôpitaux de Paris · FRInserm · FRSorbonne Paris Cité · FRInstitut des Maladies Génétiques Imagine · FRCentre Hospitalier Intercommunal de Poissy · FRDélégation Paris 5 · FRHôpital Jeanne de Flandre · FRHôpitaux Universitaires de Strasbourg · FRInstitut d’Hématologie et d’Oncologie Pédiatrique · FRInstitut National de Recherche en Santé Publique · MLSorbonne Université · FRUniversité de Reims Champagne-Ardenne · FRUniversité Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Congenital anomalies of the kidney and urinary tract (CAKUT) occur in three to six of 1000 live births, represent about 20% of the prenatally detected anomalies, and constitute the main cause of CKD in children. These disorders are phenotypically and genetically heterogeneous. Monogenic causes of CAKUT in humans and mice have been identified. However, despite high-throughput sequencing studies, the cause of the disease remains unknown in most patients, and several studies support more complex inheritance and the role of environmental factors and/or epigenetics in the pathophysiology of CAKUT. Here, we report the targeted exome sequencing of 330 genes, including genes known to be involved in CAKUT and candidate genes, in a cohort of 204 unrelated patients with CAKUT; 45% of the patients were severe fetal cases. We identified pathogenic mutations in 36 of 204 (17.6%) patients. These mutations included five

Indexed as

Cohort StudiesDNA-Binding ProteinsDNA Mutational AnalysisExomeFemaleHumansMalePre-B-Cell Leukemia Transcription Factor 1Proto-Oncogene ProteinsUrogenital AbnormalitiesDNA-Binding ProteinsPBX1 protein, humanPre-B-Cell Leukemia Transcription Factor 1Proto-Oncogene Proteinsgenetic renal diseasegenetics and developmentkidney development

Identifiers

PMID28566479
PMCPMC5619971
OpenAlexW2619033859

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.