Evidence map›Paper›PMID 28562030›Full record

ArticleACS synthetic biology2017

Switching Protein Localization by Site-Directed RNA Editing under Control of Light.

Paul Vogel, Alfred Hanswillemenke, Thorsten Stafforst

Abstract read
In one paragraph

Article in ACS synthetic biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  6. Review
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  8. Review
  9. Article
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  11. Article
  12. Article
  13. Controlling Site-Directed RNA Editing by Chemically Induced Dimerization.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  14. Article
  15. Base editing: advances and therapeutic opportunities.Nature reviews. Drug discovery · 2020
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Paul VogelUniversity of Tübingen , Interfaculty Institute of Biochemistry, Auf der Morgenstelle 15, 72076 Tübingen, Germany.
Alfred HanswillemenkeUniversity of Tübingen , Interfaculty Institute of Biochemistry, Auf der Morgenstelle 15, 72076 Tübingen, Germany.
Thorsten StafforstUniversity of Tübingen , Interfaculty Institute of Biochemistry, Auf der Morgenstelle 15, 72076 Tübingen, Germany.ORCID 0000-0001-9359-3439

Funding

European Research Council 647328
6 · The paper itself

Abstract

Site directed RNA editing is an engineered tool for the posttranscriptional manipulation of RNA and proteins. Here, we demonstrate the inclusion of additional N- and C-terminal protein domains in an RNA editing-dependent manner to switch between protein isoforms in mammalian cell culture. By inclusion of localization signals, a switch of the subcellular protein localization was achieved. This included the shift from the cytoplasm to the outer-membrane, which typically is inaccessible at the protein-level. Furthermore, the strategy allows to implement photocaging to achieve spatiotemporal control of isoform switching. The strategy does not require substantial genetic engineering, and might well complement current optogenetic and optochemical approaches.

Indexed as

Genes, SwitchHEK293 CellsHumansLightMutagenesis, Site-DirectedProteinsRNA EditingSubcellular FractionsProteinsepitranscriptomicsgene regulationoptogeneticsphotocagingphotocontrolprotein localizationRNA editing

Identifiers

PMID28562030
PMCPMC5600885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.