Evidence map›Paper›PMID 28560257›Full record

ArticleNPJ schizophrenia2017

Generating testable hypotheses for schizophrenia and rheumatoid arthritis pathogenesis by integrating epidemiological, genomic, and protein interaction data.

Tulsi A Malavia, Srilakshmi Chaparala, Joel Wood, Kodavali Chowdari, Konasale M Prasad, Lora McClain, Anil G Jegga, Madhavi K Ganapathiraju, Vishwajit L Nimgaonkar

Open access · goldAbstract read
In one paragraph

Article in NPJ schizophrenia, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 3 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 3 syntheses or guidelines pooled it, 58 citations in OpenAlex.

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  10. Genetic modifiers of cognitive decline in PSEN1 E280A Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tulsi A MalaviaDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
Srilakshmi ChaparalaDepartment of Biomedical Informatics, School of Medicine, University of Pittsburgh, Pittsburgh, PA USA.
Joel WoodDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
Kodavali ChowdariDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
Konasale M PrasadDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
Lora McClainDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
Anil G JeggaDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH USA.
Madhavi K GanapathirajuDepartment of Biomedical Informatics, School of Medicine, University of Pittsburgh, Pittsburgh, PA USA.
Vishwajit L NimgaonkarDepartment of Psychiatry, University of Pittsburgh, Pittsburgh, USA.
University of Pittsburgh · USCincinnati Children's Hospital Medical Center · US

Funding

Project 5: In vivo measurement of GABA transmission in healthy controls & subjectP50MH084053 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEWIS, DAVID A · 2008 to 2012
$11.5M
A Neurobehavioral Family Study of SchizophreniaR01MH063480 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NIMGAONKAR, VISHWAJIT LAXMIKANT · 2001 to 2018
$6.1M
Multi-pronged genetic studies of schizophrenia in an inbred populationR01MH093246 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MANSOUR, HADER A., NIMGAONKAR, VISHWAJIT LAXMIKANT · 2012 to 2016
$2.6M
Discovery of Mental Health and Inflammation (MHAIN) InteractomeR01MH094564 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GANAPATHIRAJU, MADHAVI K · 2011 to 2015
$1.9M
NIMH NIH HHS P50 MH084053NIMH NIH HHS R01 MH063480NIMH NIH HHS R01 MH093246NIMH NIH HHS R01 MH094564
6 · The paper itself

Abstract

Patients with schizophrenia and their relatives have reduced prevalence of rheumatoid arthritis. Schizophrenia and rheumatoid arthritis genome-wide association studies also indicate negative genetic correlations, suggesting that there may be shared pathogenesis at the DNA level or downstream. A portion of the inverse prevalence could be attributed to pleiotropy, i.e., variants of a single nucleotide polymorphism that could confer differential risk for these disorders. To study the basis for such an interrelationship, we initially compared lists of single nucleotide polymorphisms with significant genetic associations (

Identifiers

PMID28560257
PMCPMC5441529
OpenAlexW2591036139

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.