Evidence map›Paper›PMID 28559328›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Photoactivation mechanism of a carotenoid-based photoreceptor.

Sepalika Bandara, Zhong Ren, Lu Lu, Xiaoli Zeng, Heewhan Shin, Kai-Hong Zhao, Xiaojing Yang

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Atomistic simulations reveal the photoactivation mechanism of a carotenoid-binding photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. A Bright and Dynamic Future in Structural Biology.Advances in experimental medicine and biology · 2026
    Review
  5. Phycobilisome core architecture influences photoprotective quenching by the Orange Carotenoid Protein.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. A favorable path to domain separation in the orange carotenoid protein.Protein science : a publication of the Protein Society · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Structural basis of molecular logic OR in a dual-sensor histidine kinase.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sepalika BandaraDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.
Zhong RenDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607; xiaojing@uic.edu zren@uic.edu khzhao@163.com.
Lu LuState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China.
Xiaoli ZengDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.
Heewhan ShinDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.
Kai-Hong ZhaoState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; xiaojing@uic.edu zren@uic.edu khzhao@163.com.
Xiaojing YangDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607; xiaojing@uic.edu zren@uic.edu khzhao@163.com.
University of Illinois Chicago · USHuazhong Agricultural University · CN

Funding

Structures, Dynamics and Signaling Mechanisms of Modular PhotoreceptorsR01EY024363 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YANG, XIAOJING · 2014 to 2021
$2.9M
NEI NIH HHS R01 EY024363
6 · The paper itself

Abstract

Photoprotection is essential for efficient photosynthesis. Cyanobacteria have evolved a unique photoprotective mechanism mediated by a water-soluble carotenoid-based photoreceptor known as orange carotenoid protein (OCP). OCP undergoes large conformational changes in response to intense blue light, and the photoactivated OCP facilitates dissipation of excess energy via direct interaction with allophycocyanins at the phycobilisome core. However, the structural events leading up to the OCP photoactivation remain elusive at the molecular level. Here we present direct observations of light-induced structural changes in OCP captured by dynamic crystallography. Difference electron densities between the dark and illuminated states reveal widespread and concerted atomic motions that lead to altered protein-pigment interactions, displacement of secondary structures, and domain separation. Based on these crystallographic observations together with site-directed mutagenesis, we propose a molecular mechanism for OCP light perception, in which the photochemical property of a conjugated carbonyl group is exploited. We hypothesize that the OCP photoactivation starts with keto-enol tautomerization of the essential 4-keto group in the carotenoid, which disrupts the strong hydrogen bonds between the bent chromophore and the protein moiety. Subsequent structural changes trapped in the crystal lattice offer a high-resolution glimpse of the initial molecular events as OCP begins to transition from the orange-absorbing state to the active red-absorbing state.

Indexed as

Bacterial ProteinsCrystallographyModels, MolecularPhotoreceptors, MicrobialProtein ConformationBacterial Proteinsorange carotenoid protein, SynechocystisPhotoreceptors, Microbialcarotenoid-binding proteindynamic crystallographylight perceptionphotoprotectionphotoreceptor

Identifiers

PMID28559328
PMCPMC5474822
OpenAlexW2618662740

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.