Evidence map›Paper›PMID 28559317›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Structure-guided evolution of antigenically distinct adeno-associated virus variants for immune evasion.

Longping Victor Tse, Kelli A Klinc, Victoria J Madigan, Ruth M Castellanos Rivera, Lindsey F Wells, L Patrick Havlik, J Kennon Smith, Mavis Agbandje-McKenna, Aravind Asokan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed, 2 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 2 syntheses or guidelines pooled it, 214 citations in OpenAlex.

  1. What's new and what's next for gene therapy in Pompe disease?Expert opinion on biological therapy · 2022
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Immunogenicity of Gene and Cell Therapies.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Dose-finding andMolecular therapy. Methods & clinical development · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Longping Victor TseGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Kelli A KlincGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Victoria J MadiganGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Ruth M Castellanos RiveraGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Lindsey F WellsGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
L Patrick HavlikGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
J Kennon SmithDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32611.
Mavis Agbandje-McKennaDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32611.
Aravind AsokanGene Therapy Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599; aravind@med.unc.edu.
University of North Carolina at Chapel Hill · USUniversity of Florida · US

Funding

VECTOR AND MOLECULAR BIOLOGY COREP01HL112761 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MONAHAN, PAUL E · 2013 to 2017
$11.3M
Determinants of AAV TropismR01HL089221 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Aravind Asokan · 2009 to 2026
$8.1M
Structural studies of AAV capsids and their glycan receptor interactionsR01GM082946 · NIGMS · UNIVERSITY OF FLORIDA · PI ROBERT MCKENNA · 2007 to 2026
$6.1M
BASIC MICROBIOLOGY &INFECTIOUS DISEASEST32AI007110 · NIAID · UNIVERSITY OF FLORIDA · PI Stephanie M Karst · 1985 to 2026
$4.3M
Training Program in Biomolecular TechnologyT32GM008799 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEACH, J. KENT · 2002 to 2016
$2.4M
NHLBI NIH HHS P01 HL112761NHLBI NIH HHS R01 HL089221NIAID NIH HHS T32 AI007110NIGMS NIH HHS R01 GM082946NIGMS NIH HHS T32 GM008799
6 · The paper itself

Abstract

Preexisting neutralizing antibodies (NAbs) against adeno-associated viruses (AAVs) pose a major, unresolved challenge that restricts patient enrollment in gene therapy clinical trials using recombinant AAV vectors. Structural studies suggest that despite a high degree of sequence variability, antibody recognition sites or antigenic hotspots on AAVs and other related parvoviruses might be evolutionarily conserved. To test this hypothesis, we developed a structure-guided evolution approach that does not require selective pressure exerted by NAbs. This strategy yielded highly divergent antigenic footprints that do not exist in natural AAV isolates. Specifically, synthetic variants obtained by evolving murine antigenic epitopes on an AAV serotype 1 capsid template can evade NAbs without compromising titer, transduction efficiency, or tissue tropism. One lead AAV variant generated by combining multiple evolved antigenic sites effectively evades polyclonal anti-AAV1 neutralizing sera from immunized mice and rhesus macaques. Furthermore, this variant displays robust immune evasion in nonhuman primate and human serum samples at dilution factors as high as 1:5, currently mandated by several clinical trials. Our results provide evidence that antibody recognition of AAV capsids is conserved across species. This approach can be applied to any AAV strain to evade NAbs in prospective patients for human gene therapy.

Indexed as

Amino Acid SequenceAnimalsAntibodies, NeutralizingAntibodies, ViralAntigen-Antibody ComplexAntigenic VariationAntigens, ViralCapsid ProteinsDependovirusDirected Molecular EvolutionFemaleGenetic TherapyGenetic VectorsHEK293 CellsHumansImmune EvasionAntibodies, NeutralizingAntibodies, ViralAntigen-Antibody ComplexAntigens, ViralCapsid Proteinsadeno-associatedantibody evasionantigenicitygene therapyneutralizing antibody

Identifiers

PMID28559317
PMCPMC5474820
OpenAlexW2617246817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.